Quantitative determination of mechanical stability in the novel coronavirus spike protein

Nanoscale. 2020 Aug 21;12(31):16409-16413. doi: 10.1039/d0nr03969a. Epub 2020 Jul 29.

Abstract

We report on the novel observation about the gain in nanomechanical stability of the SARS-CoV-2 (CoV2) spike (S) protein in comparison with SARS-CoV from 2002 (CoV1). Our findings have several biological implications in the subfamily of coronaviruses, as they suggest that the receptor binding domain (RBD) (∼200 amino acids) plays a fundamental role as a damping element of the massive viral particle's motion prior to cell-recognition, while also facilitating viral attachment, fusion and entry. The mechanical stability via pulling of the RBD is 250 pN and 200 pN for CoV2 and CoV1 respectively, and the additional stability observed for CoV2 (∼50 pN) might play a role in the increasing spread of COVID-19.

Publication types

  • Comparative Study

MeSH terms

  • Amino Acid Sequence
  • Angiotensin-Converting Enzyme 2
  • Betacoronavirus / chemistry*
  • Binding Sites
  • Humans
  • Molecular Dynamics Simulation
  • Peptidyl-Dipeptidase A / metabolism
  • Protein Binding
  • Protein Domains
  • Protein Stability
  • SARS-CoV-2
  • Severe acute respiratory syndrome-related coronavirus / chemistry
  • Species Specificity
  • Spike Glycoprotein, Coronavirus / chemistry*
  • Spike Glycoprotein, Coronavirus / metabolism

Substances

  • Spike Glycoprotein, Coronavirus
  • Peptidyl-Dipeptidase A
  • ACE2 protein, human
  • Angiotensin-Converting Enzyme 2