Insight into enzyme-catalyzed aziridine formation mechanism in ficellomycin biosynthesis

Eur J Med Chem. 2020 Oct 15:204:112639. doi: 10.1016/j.ejmech.2020.112639. Epub 2020 Jul 19.

Abstract

Ficellomycin is an aziridine-containing antibiotic, produced by Streptomyces ficellus. Based on the newly identified ficellomycin gene cluster and the assigned functions of its genes, a possible pathway for aziridine ring formation in ficellomycin was proposed, which is a complex process involving at least 3 enzymatic steps. To obtain support for the proposed mechanism, the targeted genes encoding sulfate adenylyltransferase, adenylsulfate kinase, and a putative sulfotransferase were respectively disrupted and the subsequent analysis of their fermentation products revealed that all the three genes were involved in aziridine formation. To further confirm the mechanism, the key gene encoding a putative sulfotransferase was over expressed in Escherichia coli Rosseta (DE3). Enzyme assays indicated that the expressed sulfotransferase could specifically transfer a sulfo group from 3'-phosphoadenosine-5'-phosphosulfate (PAPS) onto the hydroxyl group of (R)-(-)-2-pyrrolidinemethanol. This introduces a good leaving group in the form of the sulfated hydroxyl moiety, which is then converted into an aziridine ring through an intramolecular nucleophilic attack by the adjacent secondary amine. The sulfation/intramolecular cyclization reaction sequence maybe a general strategy for aziridine biosynthesis in microorganisms. Discovery of this mechanism revealed an enzyme-catalyzed route for the synthesis of aziridine-containing reagents and provided an important insight into the functional diversity of sulfotransferases.

Keywords: Aziridine; Ficellomycin; Intramolecular cyclization; Sulfotransferase.

MeSH terms

  • Aziridines / metabolism*
  • Catalysis
  • Cyclization
  • Drug Design
  • Electrophoresis, Polyacrylamide Gel
  • Enzymes / metabolism*
  • Fermentation
  • Genes, Bacterial
  • Intercellular Signaling Peptides and Proteins / biosynthesis*
  • Multigene Family
  • Streptomyces / genetics
  • Streptomyces / metabolism
  • Substrate Specificity

Substances

  • Aziridines
  • Enzymes
  • Intercellular Signaling Peptides and Proteins
  • aziridine
  • ficellomycin

Supplementary concepts

  • Streptomyces ficellus