Developmental Attenuation of Neuronal Apoptosis by Neural-Specific Splicing of Bak1 Microexon

Neuron. 2020 Sep 23;107(6):1180-1196.e8. doi: 10.1016/j.neuron.2020.06.036. Epub 2020 Jul 24.

Abstract

Continuous neuronal survival is vital for mammals because mammalian brains have limited regeneration capability. After neurogenesis, suppression of apoptosis is needed to ensure a neuron's long-term survival. Here we describe a robust genetic program that intrinsically attenuates apoptosis competence in neurons. Developmental downregulation of the splicing regulator PTBP1 in immature neurons allows neural-specific splicing of the evolutionarily conserved Bak1 microexon 5. Exon 5 inclusion triggers nonsense-mediated mRNA decay (NMD) and unproductive translation of Bak1 transcripts (N-Bak mRNA), leading to suppression of pro-apoptotic BAK1 proteins and allowing neurons to reduce apoptosis. Germline heterozygous ablation of exon 5 increases BAK1 proteins exclusively in the brain, inflates neuronal apoptosis, and leads to early postnatal mortality. Therefore, neural-specific exon 5 splicing and depletion of BAK1 proteins uniquely repress neuronal apoptosis. Although apoptosis is important for development, attenuation of apoptosis competence through neural-specific splicing of the Bak1 microexon is essential for neuronal and animal survival.

Keywords: AS-NMD; BAK; BCL2 family proteins; NMD; PTB; PTBP; PTBP2; UPF2; alternative splicing; cell death; neural development; neurogenesis; neuronal lifespan.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • Apoptosis*
  • Brain / growth & development
  • Brain / metabolism
  • Cell Line, Tumor
  • Cells, Cultured
  • Female
  • Heterogeneous-Nuclear Ribonucleoproteins / genetics
  • Heterogeneous-Nuclear Ribonucleoproteins / metabolism
  • Male
  • Mice
  • Mice, Inbred C57BL
  • Mutation
  • Neural Stem Cells / cytology
  • Neural Stem Cells / metabolism
  • Neurogenesis*
  • Nonsense Mediated mRNA Decay
  • Polypyrimidine Tract-Binding Protein / genetics
  • Polypyrimidine Tract-Binding Protein / metabolism
  • RNA Splicing*
  • bcl-2 Homologous Antagonist-Killer Protein / genetics*
  • bcl-2 Homologous Antagonist-Killer Protein / metabolism

Substances

  • Bak1 protein, mouse
  • Heterogeneous-Nuclear Ribonucleoproteins
  • Ptbp1 protein, mouse
  • bcl-2 Homologous Antagonist-Killer Protein
  • Polypyrimidine Tract-Binding Protein