Next-Generation Immunosequencing Reveals Pathological T-Cell Architecture in Autoimmune Hepatitis

Hepatology. 2021 Apr;73(4):1436-1448. doi: 10.1002/hep.31473. Epub 2021 Feb 8.

Abstract

Background and aims: Autoimmune hepatitis (AIH) is a chronic liver disease that regularly relapses when immunosuppression is tapered. It is thought to be driven by T-cells, whereas the etiologic impact of an apparently deregulated B lineage system, as evidenced by hypergammaglobulinemia and autoantibodies, remains elusive. We set out to investigate T and B cell repertoires supporting chronic inflammation in AIH.

Approach and results: T and B cell receptor (TCR/BCR) and human leukocyte antigen (HLA) next-generation immunosequencing were used to record immune signatures from a cohort of 60 patients with AIH and disease controls. Blood and liver B lineage immune metrics were not indicative of a dominant directional antigen selection apart from a slight skewing of IGHV-J genes. More importantly, we found strong AIH-specific TRBV-J skewing not attributable to the HLA-DRB1 specificities of the cohort. This TCR repertoire bias was generated as a result of peripheral T cell (de)selection and persisted in disease remission. Using a clustering algorithm according to antigenic specificity, we identified liver TCR clusters that were shared between patients with AIH but were absent or deselected in patients with other liver pathologies.

Conclusions: Patients with AIH show profound and persisting T-cell architectural changes that may explain high relapse rates after tapering immunosuppression. Liver T-cell clusters shared between patients may mediate liver damage and warrant further study.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Aged, 80 and over
  • B-Lymphocytes / immunology
  • Case-Control Studies
  • Cohort Studies
  • Female
  • HLA-DRB1 Chains / genetics
  • Hepacivirus*
  • Hepatitis C / blood
  • Hepatitis C / immunology*
  • Hepatitis, Autoimmune / blood
  • Hepatitis, Autoimmune / immunology*
  • Hepatitis, Autoimmune / therapy
  • High-Throughput Nucleotide Sequencing / methods*
  • Humans
  • Immunosuppression Therapy / methods
  • Liver Cirrhosis, Biliary / blood
  • Liver Cirrhosis, Biliary / immunology*
  • Male
  • Middle Aged
  • Receptors, Antigen, B-Cell / genetics
  • Receptors, Antigen, T-Cell / genetics*
  • Recurrence
  • T-Lymphocytes / immunology*
  • Young Adult

Substances

  • HLA-DRB1 Chains
  • Receptors, Antigen, B-Cell
  • Receptors, Antigen, T-Cell