Sequence analysis of nonulosonic acid biosynthetic gene clusters in Vibrionaceae and Moritella viscosa

Sci Rep. 2020 Jul 20;10(1):11995. doi: 10.1038/s41598-020-68492-3.

Abstract

Nonulosonic acid (NulO) biosynthesis in bacteria is directed by nab gene clusters that can lead to neuraminic, legionaminic or pseudaminic acids. Analysis of the gene content from a set mainly composed of Aliivibrio salmonicida and Moritella viscosa strains reveals the existence of several unique nab clusters, for which the NulO products were predicted. This prediction method can be used to guide tandem mass spectrometry studies in order to verify the products of previously undescribed nab clusters and identify new members of the NulOs family.

MeSH terms

  • Bacterial Proteins / chemistry
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Biosynthetic Pathways / genetics*
  • Catalytic Domain
  • Evolution, Molecular
  • Moritella / genetics*
  • Multigene Family*
  • Phylogeny
  • Sequence Analysis, DNA*
  • Sugar Acids / chemistry
  • Sugar Acids / metabolism*
  • Vibrionaceae / genetics*

Substances

  • Bacterial Proteins
  • Sugar Acids