Metabolic flux and transcriptome analyses provide insights into the mechanism underlying zinc sulfate improved β-1,3-D-glucan production by Aureobasidium pullulans

Int J Biol Macromol. 2020 Dec 1:164:140-148. doi: 10.1016/j.ijbiomac.2020.07.131. Epub 2020 Jul 16.

Abstract

The effects of zinc sulfate at various concentrations on β-1,3-D-glucan (β-glucan) and pullulan production were investigated in flasks, and 0.1 g/L zinc sulfate was found to be the optimum concentration favoring increased β-glucan production. When batch culture of Aureobasidium pullulans CCTCC M 2012259 with 0.1 g/L zinc sulfate was carried out, the maximum dry biomass decreased by 16.9% while β-glucan production significantly increased by 120.5%, compared to results obtained from the control without zinc sulfate addition. To reveal the mechanism underlying zinc sulfate improved β-glucan production, both metabolic flux analysis and RNA-seq analysis were performed. The results indicated that zinc sulfate decreased carbon flux towards biomass formation and ATP supply, down-regulated genes associated with membrane part and cellular components organization, leading to a decrease in dry cell weight. However, zinc sulfate increased metabolic flux towards β-glucan biosynthesis, up-regulated genes related to glycan biosynthesis and nucleotide metabolism, resulting in improved β-glucan production. This study provides insights into the changes in the metabolism of A. pullulans in response to zinc sulfate, and can serve as a valuable reference of genetic information for improving the production of polysaccharides through metabolic engineering.

Keywords: Metabolic flux analysis; Pullulan; RNA-Seq; UDPG; Zinc sulfate; β-1,3-D-Glucan.

MeSH terms

  • Aureobasidium / drug effects*
  • Aureobasidium / genetics
  • Aureobasidium / metabolism
  • Base Sequence
  • Fermentation
  • Gene Expression Regulation, Bacterial / drug effects
  • Gene Ontology
  • Glucans / biosynthesis
  • Polysaccharides, Bacterial / biosynthesis
  • Polysaccharides, Bacterial / isolation & purification
  • Proteoglycans / biosynthesis*
  • RNA, Bacterial / genetics
  • RNA, Bacterial / isolation & purification
  • RNA, Messenger / genetics
  • RNA, Messenger / isolation & purification
  • Real-Time Polymerase Chain Reaction
  • Transcriptome / drug effects
  • Up-Regulation / drug effects
  • Zinc Sulfate / pharmacology*

Substances

  • Glucans
  • Polysaccharides, Bacterial
  • Proteoglycans
  • RNA, Bacterial
  • RNA, Messenger
  • polysaccharide-K
  • Zinc Sulfate
  • pullulan