"Plug and Play" logic gate construction based on chemically triggered fluorescence switching of gold nanoparticles conjugated with Cy3-tagged aptamer

Mikrochim Acta. 2020 Jul 9;187(8):437. doi: 10.1007/s00604-020-04421-5.

Abstract

Gold nanoparticles (AuNPs) conjugated with Cy3-tagged aptamer which can specifically recognize chloramphenicol (CAP) (referred to as AuNPs-AptCAP) are described. CAP can trigger the configuration change of CAP binding aptamer, and thus switching the fluorescence of AuNPs-AptCAP through changing the efficiency of the fluorescence resonance energy transfer (FRET) system with Cy3 as donors and AuNPs as recipients. AuNPs-AptCAP exhibits a linear range of CAP concentrations from 26.0 to 277 μg L-1 with a limit of detection of 8.1 μg L-1 when Cy3 was excited at 530 nm and emission was measured at 570 nm. More importantly, AuNPs-AptCAP can be utilized as signal transducers for the build-up of a series of logic gates including YES, PASS 0, INH, NOT, PASS 1, and NAND. Utilizing the principle of a metal ion-mediated fluorescence switch together with a strong metal ion chelator, the fluorescence of AuNPs-AptCAP could be modulated by adding metal ions and EDTA sequentially. Therefore, a "Plug and Play" logic system based on AuNPs-AptCAP has been realized by simply adding other components to create new logic functions. This work highlights the advantages of simple synthesis and facile fluorescence switching properties, which will provide useful knowledge for the establishment of molecular logic systems. Graphical abstract.

Keywords: Aptamer; Chloramphenicol; Fluorescence resonance energy transfer; Gold nanoparticles; Molecular logic gate.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aptamers, Nucleotide / chemistry*
  • Base Sequence
  • Carbocyanines / chemistry*
  • Chloramphenicol / chemistry
  • DNA / chemistry
  • Edetic Acid / chemistry
  • Fluorescence
  • Fluorescence Resonance Energy Transfer
  • Fluorescent Dyes / chemistry*
  • Gold / chemistry
  • Immobilized Nucleic Acids / chemistry
  • Limit of Detection
  • Logic*
  • Mercury / chemistry
  • Metal Nanoparticles / chemistry*
  • Nickel / chemistry

Substances

  • Aptamers, Nucleotide
  • Carbocyanines
  • Fluorescent Dyes
  • Immobilized Nucleic Acids
  • cyanine dye 3
  • Chloramphenicol
  • Gold
  • Nickel
  • DNA
  • Edetic Acid
  • Mercury