DNA Features Viewer: a sequence annotation formatting and plotting library for Python

Bioinformatics. 2020 Aug 1;36(15):4350-4352. doi: 10.1093/bioinformatics/btaa213.

Abstract

Motivation: Although the Python programming language counts many Bioinformatics and Computational Biology libraries; none offers customizable sequence annotation visualizations with layout optimization.

Results: DNA Features Viewer is a sequence annotation plotting library which optimizes plot readability while letting users tailor other visual aspects (colors, labels, highlights etc.) to their particular use case.

Availability and implementation: Open-source code and documentation are available on Github under the MIT license (https://github.com/Edinburgh-Genome-Foundry/DnaFeaturesViewer).

Supplementary information: Supplementary data are available at Bioinformatics online.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Computational Biology*
  • DNA
  • Gene Library
  • Programming Languages
  • Software*

Substances

  • DNA