Ribosome rescue activity of an Arabidopsis thaliana ArfB homolog

Genes Genet Syst. 2020 Aug 27;95(3):119-131. doi: 10.1266/ggs.20-00007. Epub 2020 Jul 2.

Abstract

A homolog of the bacterial ribosome rescue factor ArfB was identified in Arabidopsis thaliana. The factor, named AtArfB for Arabidopsis thaliana ArfB, showed ribosome rescue activity in both in vivo and in vitro assays based on the bacterial translation system. As has been shown for ArfB, the ribosome rescue activity of AtArfB was dependent on the GGQ motif, the crucial motif for the function of class I release factors and ArfB. The C-terminal region of AtArfB was also important for its function. The N-terminal region of AtArfB, which is absent in bacterial ArfB, functioned as a transit peptide for chloroplast targeting in tobacco cells. These results strongly suggest that AtArfB is a ribosome rescue factor that functions in chloroplasts.

Keywords: Arabidopsis thaliana; ArfB; chloroplast; ribosome rescue; translation.

MeSH terms

  • ADP-Ribosylation Factors / chemistry
  • ADP-Ribosylation Factors / genetics
  • ADP-Ribosylation Factors / metabolism*
  • Arabidopsis
  • Arabidopsis Proteins / chemistry
  • Arabidopsis Proteins / genetics
  • Arabidopsis Proteins / metabolism*
  • Chloroplasts / metabolism
  • Protein Domains
  • Protein Sorting Signals
  • Protein Transport
  • Ribosomes / metabolism*

Substances

  • Arabidopsis Proteins
  • Protein Sorting Signals
  • ADP-Ribosylation Factors