Synthesis, Antimicrobial Activity and Molecular Docking of Novel Thiourea Derivatives Tagged with Thiadiazole, Imidazole and Triazine Moieties as Potential DNA Gyrase and Topoisomerase IV Inhibitors

Molecules. 2020 Jun 15;25(12):2766. doi: 10.3390/molecules25122766.

Abstract

To develop new antimicrobial agents, a series of novel thiourea derivatives incorporated with different moieties 2-13 was designed and synthesized and their biological activities were evaluated. Compounds 7a, 7b and 8 exhibited excellent antimicrobial activity against all Gram-positive and Gram-negative bacteria, and the fungal Aspergillus flavus with minimum inhibitory concentration (MIC) values ranged from 0.95 ± 0.22 to 3.25 ± 1.00 μg/mL. Furthermore, cytotoxicity studies against MCF-7 cells revealed that compounds 7a and 7b were the most potent with IC50 values of 10.17 ± 0.65 and 11.59 ± 0.59 μM, respectively. On the other hand, the tested compounds were less toxic against normal kidney epithelial cell lines (Vero cells). The in vitro enzyme inhibition assay of 8 displayed excellent inhibitory activity against Escherichia coli DNA B gyrase and moderate one against E. coli Topoisomerase IV (IC50 = 0.33 ± 1.25 and 19.72 ± 1.00 µM, respectively) in comparison with novobiocin (IC50 values 0.28 ± 1.45 and 10.65 ± 1.02 µM, respectively). Finally, the molecular docking was done to position compound 8 into the E. coli DNA B and Topoisomerase IV active pockets to explore the probable binding conformation. In summary, compound 8 may serve as a potential dual E. coli DNA B and Topoisomerase IV inhibitor.

Keywords: E. coli DNA B gyrase; E. coli Topoisomerase IV; antimicrobial; molecular docking; thiourea.

MeSH terms

  • Anti-Bacterial Agents / pharmacology
  • DNA Gyrase / chemistry
  • DNA Topoisomerase IV / antagonists & inhibitors*
  • DNA Topoisomerase IV / chemistry
  • Escherichia coli / drug effects
  • Escherichia coli / metabolism
  • Gram-Negative Bacteria / drug effects
  • Gram-Positive Bacteria / drug effects
  • Imidazoles / chemistry
  • Imidazoles / pharmacology
  • Microbial Sensitivity Tests
  • Molecular Docking Simulation
  • Structure-Activity Relationship
  • Thiadiazoles / chemistry
  • Thiadiazoles / pharmacology
  • Thiourea / analogs & derivatives
  • Thiourea / chemistry
  • Thiourea / pharmacology*
  • Topoisomerase II Inhibitors / chemistry*
  • Triazines / chemistry
  • Triazines / pharmacology

Substances

  • Anti-Bacterial Agents
  • Imidazoles
  • Thiadiazoles
  • Topoisomerase II Inhibitors
  • Triazines
  • imidazole
  • DNA Topoisomerase IV
  • DNA Gyrase
  • Thiourea