Deep learning-based fully automated detection and segmentation of lymph nodes on multiparametric-mri for rectal cancer: A multicentre study

EBioMedicine. 2020 Jun:56:102780. doi: 10.1016/j.ebiom.2020.102780. Epub 2020 Jun 5.

Abstract

Background: Accurate lymph nodes (LNs) assessment is important for rectal cancer (RC) staging in multiparametric magnetic resonance imaging (mpMRI). However, it is incredibly time-consumming to identify all the LNs in scan region. This study aims to develop and validate a deep-learning-based, fully-automated lymph node detection and segmentation (auto-LNDS) model based on mpMRI.

Methods: In total, 5789 annotated LNs (diameter ≥ 3 mm) in mpMRI from 293 patients with RC in a single center were enrolled. Fused T2-weighted images (T2WI) and diffusion-weighted images (DWI) provided input for the deep learning framework Mask R-CNN through transfer learning to generate the auto-LNDS model. The model was then validated both on the internal and external datasets consisting of 935 LNs and 1198 LNs, respectively. The performance for LNs detection was evaluated using sensitivity, positive predictive value (PPV), and false positive rate per case (FP/vol), and segmentation performance was evaluated using the Dice similarity coefficient (DSC).

Findings: For LNs detection, auto-LNDS achieved sensitivity, PPV, and FP/vol of 80.0%, 73.5% and 8.6 in internal testing, and 62.6%, 64.5%, and 8.2 in external testing, respectively, significantly better than the performance of junior radiologists. The time taken for model detection and segmentation was 1.3 s/case, compared with 200 s/case for the radiologists. For LNs segmentation, the DSC of the model was in the range of 0.81-0.82.

Interpretation: This deep learning-based auto-LNDS model can achieve pelvic LNseffectively based on mpMRI for RC, and holds great potential for facilitating N-staging in clinical practice.

Keywords: Deep learning; Detection and segmentation; Lymph node.

Publication types

  • Multicenter Study

MeSH terms

  • Adenocarcinoma / diagnostic imaging*
  • Adenocarcinoma / pathology
  • Automation
  • Clinical Competence
  • Deep Learning
  • Diffusion Magnetic Resonance Imaging
  • Female
  • Humans
  • Lymph Nodes / diagnostic imaging*
  • Lymph Nodes / pathology
  • Male
  • Multiparametric Magnetic Resonance Imaging / methods*
  • Neoplasm Staging
  • Pelvis / diagnostic imaging*
  • Pelvis / pathology
  • Radiographic Image Interpretation, Computer-Assisted / methods*
  • Radiologists
  • Rectal Neoplasms / diagnostic imaging*
  • Rectal Neoplasms / pathology
  • Sensitivity and Specificity