Genotype constellation of a rotavirus A field strain with an uncommon G8P[11] genotype combination in a rotavirus-vaccinated dairy cattle herd

Arch Virol. 2020 Aug;165(8):1855-1861. doi: 10.1007/s00705-020-04675-7. Epub 2020 May 29.

Abstract

In this report we describe the genotype constellation of a bovine rotavirus A (RVA) strain with an uncommon G8P[11] genotype combination. The RVA/Cow-wt/BRA/Y136/2017/G8P[11] strain was classified as G8-P[11]-I2-R5-C2-M2-A3-N2-T9-E2-H3. Phylogenetic analysis based on the VP7 gene showed that the Y136 strain and a human G8P[1] strain comprise a putative new (VII) lineage for the G8 genotype. In addition, two other genotypes, R5 (VP1) and T9 (NSP3), were identified in the constellation of Y136 that are rarely found in RVA strains of bovine origin. The immunological pressure caused by regular vaccination of cows might be responsible for the selection of heterologous RVA strains.

MeSH terms

  • Animals
  • Cattle
  • Feces / virology
  • Gastroenteritis / veterinary
  • Gastroenteritis / virology
  • Genome, Viral / genetics
  • Genotype
  • Humans
  • Phylogeny
  • Rotavirus / genetics*
  • Rotavirus Infections / veterinary*
  • Rotavirus Infections / virology*
  • Viral Proteins / genetics

Substances

  • Viral Proteins