Structural insight into the type-specific epitope of porcine circovirus type 3

Biosci Rep. 2020 Jun 26;40(6):BSR20201109. doi: 10.1042/BSR20201109.

Abstract

The recently identified pathogenic Porcine circovirus type 3 (PCV3) may threaten to reduce the pig population dramatically worldwide. In our previous study, a PCV3-specific monoclonal antibody (mAb-1H11) was successfully applied in immune-histochemistry staining and ELISA, which specifically recognize PCV3 capsid protein in PCV3-positive pig tissues. In the present study, we expressed and purified the soluble sole capsid protein of PCV3. The purified capsid protein was capable of self-assembly into virus-like-particles (VLPs), which is validated by transmission electron microscopy and dynamic light scattering assays. Moreover, the epitope of mAb-1H11 was identified in the CD-loop region (a.a. 72-79) on the VLP surface, which is confirmed by PCV2-PCV3 epitope swapping assay. For the first time, we determined the cryo-EM structure of PCV3-VLP at 8.5 Å resolution that reveals the detailed structural information of PCV3-VLP. In our cryo-EM structure, PCV3-VLP is composed of 60 capsid protein subunits assembled with T = 1 icosahedral symmetry. Consistent to our bio-dot Western blot assay, the structural comparison between PCV3 and PCV2 revealed significant structural differences in the surface-exposed loops, including the CD-loop (a.a. 72-79) and the EF-loop (a.a. 109-131). Our work provides a structural framework for engineering future PCV3 vaccine and diagnosis kits development.

Keywords: Porcine circovirus type 3 (PCV3); capsid protein; cryo-EM structure; prophylactic vaccine; type-specific epitope; virus-like-particle (VLP).

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Antigens, Viral / genetics
  • Antigens, Viral / immunology*
  • Antigens, Viral / ultrastructure
  • Capsid Proteins / genetics
  • Capsid Proteins / immunology*
  • Capsid Proteins / ultrastructure
  • Circoviridae Infections / virology*
  • Circovirus / genetics
  • Circovirus / immunology*
  • Circovirus / ultrastructure
  • Cryoelectron Microscopy
  • Epitope Mapping
  • Epitopes*
  • Models, Molecular
  • Protein Conformation
  • Structure-Activity Relationship
  • Swine / virology*
  • Viral Vaccines / genetics
  • Viral Vaccines / immunology*

Substances

  • Antigens, Viral
  • Capsid Proteins
  • Epitopes
  • Viral Vaccines