Characterization of the complete mitochondrial genome of Drawida gisti (Metagynophora, Moniligastridae) and comparison with other Metagynophora species

Genomics. 2020 Sep;112(5):3056-3064. doi: 10.1016/j.ygeno.2020.05.020. Epub 2020 May 23.

Abstract

Here, the complete mitochondrial genome (mitogenome) of Drawida gisti was sequenced and compared with the mitogenomes of other Metagynophora species. The circular mitogenome was 14,648 bp in length and contained two ribosomal RNA genes (rRNAs), 13 protein-coding genes (PCGs), and 22 transfer RNA genes (tRNAs). The types of constitutive genes and the direction of the coding strand that appeared in Drawida mitogenome were identical to those observed in other Metagynophora species, except for a missing lengthy non-coding region. The conservative relationships between Drawida species were supported by the overall analyses of 13 PCGs, two rRNAs, and 22 tRNAs. A comparison of the Metagynophora mitogenomes revealed that the ATP8 gene possessed the highest polymorphism among the 13 PCGs and two rRNAs. Phylogenetic analysis suggested that the Moniligastridae contained Drawida, which is a primitive Metagynophora group. Our study provides a step forward toward elucidating the evolutionary linkages within Drawida and even Metagynophora.

Keywords: Drawida gisti; Earthworm; Metagynophora; Mitochondrial genome; Phylogenetic analysis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Composition
  • Codon Usage
  • DNA, Mitochondrial / chemistry
  • Genes, rRNA
  • Genome, Mitochondrial*
  • Mitochondrial Proteins / genetics
  • Oligochaeta / classification
  • Oligochaeta / genetics*
  • Phylogeny
  • RNA, Transfer / chemistry
  • RNA, Transfer / genetics

Substances

  • DNA, Mitochondrial
  • Mitochondrial Proteins
  • RNA, Transfer