Proteomics of intracellular freezing survival

PLoS One. 2020 May 26;15(5):e0233048. doi: 10.1371/journal.pone.0233048. eCollection 2020.

Abstract

Panagrolaimus sp. DAW1, a nematode cultured from the Antarctic, has the extraordinary physiological ability to survive total intracellular freezing throughout all of its compartments. While a few other organisms, all nematodes, have subsequently also been found to survive freezing in this manner, P. sp. DAW1 has so far shown the highest survival rates. In addition, P. sp. DAW1 is also, depending on the rate or extent of freezing, able to undergo cryoprotective dehydration. In this study, the proteome of P. sp DAW1 is explored, highlighting a number of differentially expressed proteins and pathways that occur when the nematodes undergo intracellular freezing. Among the strongest signals after being frozen is an upregulation of proteases and the downregulation of cytoskeletal and antioxidant activity, the latter possibly accumulated before freezing much in the way the sugar trehalose has been shown to be stored during acclimation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acclimatization / physiology*
  • Animals
  • Antioxidants / metabolism
  • Cold Temperature
  • Gene Expression Regulation
  • Gene Regulatory Networks*
  • Helminth Proteins / metabolism
  • Peptide Hydrolases / metabolism
  • Protein Interaction Maps
  • Proteomics / methods*
  • Rhabditida / physiology*

Substances

  • Antioxidants
  • Helminth Proteins
  • Peptide Hydrolases

Grants and funding

Funding for this project was made available through the Innovation Centre of the British Antarctic Survey.