Tyrosine 135 of the β1 subunit as binding site of BAY-543: Importance of the Y-x-S-x-R motif for binding and activation by sGC activator drugs

Eur J Pharmacol. 2020 Aug 15:881:173203. doi: 10.1016/j.ejphar.2020.173203. Epub 2020 May 21.

Abstract

Soluble guanylyl cyclase (sGC), the major receptor for nitric oxide (NO), is a heterodimer consisting of two subunits, the α and the β subunit. The NO/sGC/cGMP signaling pathway is protective in different disease pathomechanisms including angina pectoris, pulmonary hypertension and fibrotic diseases. The natural ligand heme has two carboxylic acids which interact in the β1 heme nitric oxide oxygen binding (HNOX) domain with the amino acids of the highly conserved Y-x-S-x-R motif. The Y-x-S-x-R motif is also involved in binding of the dicarboxylic activators cinaciguat and BAY 60-2770 as indicated by crystallization studies of sGC activator and bacterial HNOX homologs. To what extent the Y-x-S-x-R motif hydrogen bond network contributes to binding of monocarboxylic acids has not been examined so far. In the current paper, the chemical structural formula of the novel monocarboxylic drug BAY-543 is described for the first time. Using this novel drug, we evaluate the importance of the amino acids Y135 and R139 for thermostabilization and activation in comparison to the dicarboxylic acid BAY 60-2770. Measurements with point mutated sGC variants demonstrate tyrosine 135 as exclusive binding site of the monocarboxylic acid BAY-543 but not the dicarboxylic BAY 60-2770.

Keywords: Nitric oxide; Soluble guanylyl cyclase; Y-x-S-x-R motif; cGMP; sGC activators.

Publication types

  • Comparative Study

MeSH terms

  • Amino Acid Motifs
  • Animals
  • Benzoates / metabolism
  • Benzoates / pharmacology
  • Binding Sites
  • Biphenyl Compounds / metabolism
  • Biphenyl Compounds / pharmacology
  • Enzyme Activation
  • Enzyme Activators / chemistry
  • Enzyme Activators / metabolism
  • Enzyme Activators / pharmacology*
  • HEK293 Cells
  • Humans
  • Hydrocarbons, Fluorinated / metabolism
  • Hydrocarbons, Fluorinated / pharmacology
  • Nitric Oxide / metabolism
  • Nitric Oxide / pharmacology
  • Point Mutation
  • Protein Binding
  • Protein Conformation
  • Protein Subunits
  • Sf9 Cells
  • Soluble Guanylyl Cyclase / chemistry
  • Soluble Guanylyl Cyclase / genetics
  • Soluble Guanylyl Cyclase / metabolism*
  • Structure-Activity Relationship
  • Tyrosine

Substances

  • 4-(((4-carboxybutyl) (2- (5-fluoro-2-((4'-(trifluoromethyl) biphenyl-4-yl)methoxy)phenyl)ethyl) amino)methyl)benzoic acid
  • Benzoates
  • Biphenyl Compounds
  • Enzyme Activators
  • Hydrocarbons, Fluorinated
  • Protein Subunits
  • Nitric Oxide
  • Tyrosine
  • Soluble Guanylyl Cyclase