Development and characterization of a fully human antibody targeting SCF/c-kit signaling

Int J Biol Macromol. 2020 Sep 15:159:66-78. doi: 10.1016/j.ijbiomac.2020.05.045. Epub 2020 May 11.

Abstract

CD117/c-kit, a tyrosine kinase receptor, plays a critical role in hematopoiesis, pigmentation, and fertility. The overexpression and activation of c-kit are thought to promote tumor growth and have been reported in various cancers, including leukemia, glioblastoma and mastocytosis. To disrupt the SCF/c-kit signaling axis in cancer, we generated a c-kit antagonist human antibody (NN2101) that binds to domain 2/3 of c-kit. This completely blocked the SCF-mediated phosphorylation of c-kit and inhibited TF-1 cell proliferation, erythroleukemia. In addition, the examination of binding affinity using surface plasmon resonance (SPR) assay showed that NN2101 can bind to c-kit of monkeys (KD = 2.92 × 10-10 M), rats (KD = 1.68 × 10-6 M), mice (KD = 11.5 × 10-9 M), and humans (KD = 2.83 × 10-12 M). We showed that NN2101 does not cause antibody-dependent cell-mediated cytotoxicity and complement-dependent cytotoxicity. The immunogenicity of NN2101 was similar to that of bevacizumab. Furthermore, the crystal structure of NN2101 Fab was determined and the structure of NN2101 Fab:c-kit complex was modeled. Structural information, as well as mutagenesis results, revealed that NN2101 can bind to the SCF-binding regions of c-kit. Collectively, we generated a c-kit neutralizing human antibody (NN2101) for the treatment of erythroleukemia and characterized its biophysical properties. NN2101 can potentially be used as a therapeutic antibody to treat different cancers.

Keywords: Antibody; Cancer; Crystal structure; SCF; c-kit.

MeSH terms

  • Animals
  • Antibodies, Neutralizing / chemistry
  • Antibodies, Neutralizing / immunology*
  • Antibodies, Neutralizing / pharmacology
  • Antineoplastic Agents, Immunological / chemistry
  • Antineoplastic Agents, Immunological / immunology*
  • Antineoplastic Agents, Immunological / pharmacology
  • Binding Sites, Antibody
  • Cell Proliferation / drug effects
  • Cells, Cultured
  • Epitopes / chemistry
  • Epitopes / immunology
  • HEK293 Cells
  • Haplorhini
  • Humans
  • Mice
  • Proto-Oncogene Proteins c-kit / antagonists & inhibitors
  • Proto-Oncogene Proteins c-kit / immunology*
  • Rats

Substances

  • Antibodies, Neutralizing
  • Antineoplastic Agents, Immunological
  • Epitopes
  • Proto-Oncogene Proteins c-kit