Target-Directed Approaches for Screening Small Molecules against RNA Targets

SLAS Discov. 2020 Sep;25(8):869-894. doi: 10.1177/2472555220922802. Epub 2020 May 18.

Abstract

RNA molecules have a variety of cellular functions that can drive disease pathologies. They are without a doubt one of the most intriguing yet controversial small-molecule drug targets. The ability to widely target RNA with small molecules could be revolutionary, once the right tools, assays, and targets are selected, thereby defining which biomolecules are targetable and what constitutes drug-like small molecules. Indeed, approaches developed over the past 5-10 years have changed the face of small molecule-RNA targeting by addressing historic concerns regarding affinity, selectivity, and structural dynamics. Presently, selective RNA-protein complex stabilizing drugs such as branaplam and risdiplam are in clinical trials for the modulation of SMN2 splicing, compounds identified from phenotypic screens with serendipitous outcomes. Fully developing RNA as a druggable target will require a target engagement-driven approach, and evolving chemical collections will be important for the industrial development of this class of target. In this review we discuss target-directed approaches that can be used to identify RNA-binding compounds and the chemical knowledge we have today of small-molecule RNA binders.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Azo Compounds / therapeutic use
  • Drug Design
  • Humans
  • Molecular Targeted Therapy*
  • Multiprotein Complexes / genetics
  • Neuromuscular Agents / therapeutic use
  • Pyrimidines / therapeutic use
  • RNA / drug effects*
  • RNA / genetics
  • RNA Splicing / drug effects
  • RNA Splicing / genetics
  • Small Molecule Libraries / chemistry*
  • Small Molecule Libraries / therapeutic use
  • Survival of Motor Neuron 2 Protein / genetics

Substances

  • Azo Compounds
  • Multiprotein Complexes
  • Neuromuscular Agents
  • Pyrimidines
  • SMN2 protein, human
  • Small Molecule Libraries
  • Survival of Motor Neuron 2 Protein
  • RNA
  • Risdiplam