Crystal structures, packing features, Hirshfeld surface analyses and DFT calculations of hydrogen-bond energy of two homologous 8a-aryl-2,3,4,7,8,8a-hexahydropyrrolo[1,2-a]pyrimidin-6(1H)-ones

Acta Crystallogr C Struct Chem. 2020 May 1;76(Pt 5):483-489. doi: 10.1107/S2053229620005409. Epub 2020 Apr 24.

Abstract

The crystal structures and packing features of two homologous Meyer's bicyclic lactams with fused pyrrolidone and medium-sized perhydropyrimidine rings, namely, 8a-phenyl-2,3,4,7,8,8a-hexahydropyrrolo[1,2-a]pyrimidin-6(1H)-one, C13H16N2O (1), and 8a-(4-methylphenyl)-2,3,4,7,8,8a-hexahydropyrrolo[1,2-a]pyrimidin-6(1H)-one, C14H18N2O (2), were elucidated, and Hirshfeld surface plots were calculated and drawn for visualization and a deeper analysis of the intermolecular noncovalent interactions. Molecules of 1 and 2 are weakly linked by intermolecular C=O...H-N hydrogen bonds into chains, which are in turn weakly linked by other C=O...H-Car interactions. The steric volume of the substituent significantly affects the crystal packing pattern.

Keywords: DFT calculations; Hexahydropyrrolo[1,2-a]pyrimidin-6(1H)-one; Hirshfeld surface analysis; Meyer's bicyclic lactam; crystal structure; hydrogen bonds; noncovalent interactions.