All-electrical monitoring of bacterial antibiotic susceptibility in a microfluidic device

Proc Natl Acad Sci U S A. 2020 May 19;117(20):10639-10644. doi: 10.1073/pnas.1922172117. Epub 2020 Apr 29.

Abstract

The lack of rapid antibiotic susceptibility tests adversely affects the treatment of bacterial infections and contributes to increased prevalence of multidrug-resistant bacteria. Here, we describe an all-electrical approach that allows for ultrasensitive measurement of growth signals from only tens of bacteria in a microfluidic device. Our device is essentially a set of microfluidic channels, each with a nanoconstriction at one end and cross-sectional dimensions close to that of a single bacterium. Flowing a liquid bacteria sample (e.g., urine) through the microchannels rapidly traps the bacteria in the device, allowing for subsequent incubation in drugs. We measure the electrical resistance of the microchannels, which increases (or decreases) in proportion to the number of bacteria in the microchannels. The method and device allow for rapid antibiotic susceptibility tests in about 2 h. Further, the short-time fluctuations in the electrical resistance during an antibiotic susceptibility test are correlated with the morphological changes of bacteria caused by the antibiotic. In contrast to other electrical approaches, the underlying geometric blockage effect provides a robust and sensitive signal, which is straightforward to interpret without electrical models. The approach also obviates the need for a high-resolution microscope and other complex equipment, making it potentially usable in resource-limited settings.

Keywords: antibiotic resistance; antibiotic susceptibility testing; growth and morphology; microfluidics.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Anti-Bacterial Agents / pharmacology
  • Anti-Bacterial Agents / toxicity*
  • Drug Resistance, Bacterial
  • Electric Impedance
  • Klebsiella pneumoniae / drug effects
  • Klebsiella pneumoniae / physiology
  • Microbial Sensitivity Tests / instrumentation
  • Microbial Sensitivity Tests / methods
  • Microfluidics / instrumentation
  • Microfluidics / methods*

Substances

  • Anti-Bacterial Agents