Mutations in aARS genes revealed by targeted next-generation sequencing in patients with mitochondrial diseases

Mol Biol Rep. 2020 May;47(5):3779-3787. doi: 10.1007/s11033-020-05425-3. Epub 2020 Apr 21.

Abstract

Mitochondrial diseases are a clinically heterogeneous group of multisystemic disorders that arise as a result of various mitochondrial dysfunctions. Autosomal recessive aARS deficiencies represent a rapidly growing group of severe rare inherited mitochondrial diseases, involving multiple organs, and currently without curative option. They might be related to defects of mitochondrial aminoacyl t-RNA synthetases (mtARS) that are ubiquitous enzymes involved in mitochondrial aminoacylation and the translation process. Here, using NGS analysis of 281 nuclear genes encoding mitochondrial proteins, we identified 4 variants in different mtARS in three patients from unrelated Tunisian families, with clinical features of mitochondrial disorders. Two homozygous variants were found in KARS (c.683C>T) and AARS2 (c.1150-4C>G), respectively in two patients, while two heterozygous variants in EARS2 (c.486-7C>G) and DARS2 (c.1456C>T) were concomitantly found in the third patient. Bio-informatics investigations predicted their pathogenicity and deleterious effects on pre-mRNA splicing and on protein stability. Thus, our results suggest that mtARS mutations are common in Tunisian patients with mitochondrial diseases.

Keywords: Mitochondrial disorders; NGS; Pathogenic mutations; Phenotypic variability; aARS.

Publication types

  • Case Reports

MeSH terms

  • Alanine-tRNA Ligase / genetics*
  • Alanine-tRNA Ligase / metabolism
  • Amino Acyl-tRNA Synthetases / genetics
  • Amino Acyl-tRNA Synthetases / metabolism
  • Aspartate-tRNA Ligase / genetics
  • Aspartate-tRNA Ligase / metabolism
  • Child
  • Child, Preschool
  • Female
  • Genetic Association Studies
  • High-Throughput Nucleotide Sequencing / methods
  • Homozygote
  • Humans
  • Male
  • Mitochondria / metabolism
  • Mitochondrial Diseases / genetics*
  • Mitochondrial Diseases / metabolism
  • Mitochondrial Proteins / genetics*
  • Mitochondrial Proteins / metabolism
  • Mutation / genetics
  • Pedigree

Substances

  • Mitochondrial Proteins
  • Amino Acyl-tRNA Synthetases
  • Aspartate-tRNA Ligase
  • DARS2 protein, human
  • AARS2 protein, human
  • Alanine-tRNA Ligase