Cyclin-dependent kinase inhibition: an opportunity to target protein-protein interactions

Adv Protein Chem Struct Biol. 2020:121:115-141. doi: 10.1016/bs.apcsb.2019.11.009. Epub 2019 Dec 18.

Abstract

Cyclin-dependent kinases (CDKs) play an integral part in cellular activities. To date, most of the activities have been evaluated in the cell cycle and transcription. Several diseases are affected by abnormalities in CDKs, related-pathways, or proteins that regulate CDK activity. CDKs are primarily dependent on activation by binding other proteins, namely Cyclins. In addition, phosphorylation of key CDK residues also plays a major part in CDK activity. To date, the most successful drugs have been developed against CDK4 and CDK6 and are FDA approved for use in advanced breast cancer. However, this is likely only a small fraction of the potential for targeting CDKs as a strategy against cancer and other diseases. Based on the extensive protein-protein interactions made by CDKs with other proteins (Cyclins and others), there are numerous possibilities for targeting strategies against protein-protein interactions. Here we describe the predominant roles of CDKs in the cell, key interacting proteins, significant 3-dimensional structural characteristics, and summarize the work-to-date in inhibition of CDKs.

Keywords: Cell cycle; Cyclin; Cyclin-dependent kinase; Protein-protein interactions; Structural biology; Transcription.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Antineoplastic Agents / therapeutic use*
  • Binding Sites
  • Cell Cycle / drug effects
  • Cell Cycle / genetics
  • Cyclin-Dependent Kinase Inhibitor Proteins / genetics*
  • Cyclin-Dependent Kinase Inhibitor Proteins / metabolism
  • Cyclin-Dependent Kinases / antagonists & inhibitors*
  • Cyclin-Dependent Kinases / genetics
  • Cyclin-Dependent Kinases / metabolism
  • Cyclins / genetics*
  • Cyclins / metabolism
  • Gene Expression Regulation, Neoplastic*
  • Humans
  • Models, Molecular
  • Neoplasms / drug therapy*
  • Neoplasms / genetics
  • Neoplasms / metabolism
  • Neoplasms / pathology
  • Phosphorylation / drug effects
  • Protein Binding
  • Protein Interaction Mapping
  • Protein Kinase Inhibitors / therapeutic use*
  • Protein Structure, Secondary
  • Signal Transduction
  • Transcription, Genetic

Substances

  • Antineoplastic Agents
  • Cyclin-Dependent Kinase Inhibitor Proteins
  • Cyclins
  • Protein Kinase Inhibitors
  • Cyclin-Dependent Kinases