A method for isolating RNA from canine bone

Biotechniques. 2020 Jun;68(6):311-317. doi: 10.2144/btn-2019-0153. Epub 2020 Apr 17.

Abstract

Extracting sufficient quantity and quality RNA from bone is essential for downstream application, such as transcriptomic sequencing, to evaluate gene expression. Isolation of RNA from bone presents a unique challenge owing to the hypocellular, brittle and mineralized matrix, which makes homogenizing the tissue difficult and provides little RNA to work with. Removal of contaminating tissue, such as bone marrow and connective tissue, is essential for isolating RNA that is unique to osteoblasts, osteoclasts and osteocytes. This study established a method to effectively isolate RNA from normal canine bone cells using the phalanges, without contamination from other tissue types, for downstream transcriptomic analysis.

Keywords: RNA; bone; canine; dog; osteoblasts; osteoclasts; osteocytes; sequencing.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Bone and Bones / chemistry*
  • Dogs
  • Gene Expression Regulation / genetics
  • Molecular Biology / methods*
  • Osteoblasts / chemistry
  • Osteoclasts / chemistry
  • Osteocytes / chemistry
  • RNA / chemistry
  • RNA / genetics
  • RNA / isolation & purification*
  • Transcriptome / genetics*

Substances

  • RNA