Histidine-Triad Hydrolases Provide Resistance to Peptide-Nucleotide Antibiotics

mBio. 2020 Apr 7;11(2):e00497-20. doi: 10.1128/mBio.00497-20.

Abstract

The Escherichia coli microcin C (McC) and related compounds are potent Trojan horse peptide-nucleotide antibiotics. The peptide part facilitates transport into sensitive cells. Inside the cell, the peptide part is degraded by nonspecific peptidases releasing an aspartamide-adenylate containing a phosphoramide bond. This nonhydrolyzable compound inhibits aspartyl-tRNA synthetase. In addition to the efficient export of McC outside the producing cells, special mechanisms have evolved to avoid self-toxicity caused by the degradation of the peptide part inside the producers. Here, we report that histidine-triad (HIT) hydrolases encoded in biosynthetic clusters of some McC homologs or by standalone genes confer resistance to McC-like compounds by hydrolyzing the phosphoramide bond in toxic aspartamide-adenosine, rendering them inactive.IMPORTANCE Uncovering the mechanisms of resistance is a required step for countering the looming antibiotic resistance crisis. In this communication, we show how universally conserved histidine-triad hydrolases provide resistance to microcin C, a potent inhibitor of bacterial protein synthesis.

Keywords: HinT; RiPPs; antibiotics; histidine-triad proteins; microcin C; peptide-nucleotides.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, N.I.H., Intramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anti-Bacterial Agents / metabolism*
  • Anti-Bacterial Agents / pharmacology
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Bacteriocins / genetics*
  • Biosynthetic Pathways
  • Drug Resistance, Bacterial
  • Escherichia coli / genetics
  • Hydrolases / genetics
  • Hydrolases / metabolism*
  • Multigene Family*
  • Myxococcales / drug effects
  • Myxococcales / enzymology*
  • Myxococcales / genetics*
  • Operon
  • Peptides / metabolism
  • Peptides / pharmacology

Substances

  • Anti-Bacterial Agents
  • Bacterial Proteins
  • Bacteriocins
  • Peptides
  • histidine triad protein
  • microcin
  • Hydrolases

Supplementary concepts

  • Hyalangium minutum