This work examined the contamination of poly- and perfluorinated compounds (PFASs) in the water and sediment of the Baiyangdian Lake. The total concentration of PFASs in the surface water varied from 140.5 to 1828.5 ng/L, and the highest concentration of PFASs were observed near the entrance of Fuhe river. The topmost contaminant was sodium perfluorohexanesulfonate (PFHxS) and perfluorooctanoic acid (PFOA) in the north and south of the Baiyangdian Lake respectively, which indicated different contamination sources. The total concentration of PFASs in the sediment varied from 0.48 to 30 ng/g, and the distribution of PFASs in the sediment was similar with that in the surface water. The concentrations of polyfluoroalkyl phosphoric diesters (diPAPs) were three to four orders of magnitude lower than those of perfluorocarboxylates (PFCAs) and PFSAs. Although the pore water and the surface water had similar ΣPFASs, the concentration of perfluorodecanoic acid (PFDA) in pore water was 1.4 to 4.4 times higher than that in surface water, and the concentration of perfluoropentanoic acid (PFPeA) in pore water was 20-70% that in surface water. The results of ecological risk assessment showed that the PFASs were currently of no immediate risk to the aquatic life.