A mutation near the active site of S-RNase causes self-compatibility in S-RNase-based self-incompatible plants

Plant Mol Biol. 2020 May;103(1-2):129-139. doi: 10.1007/s11103-020-00979-z. Epub 2020 Feb 23.

Abstract

The structurally simplest amino acid glycine could make contribution to nuclease activity of S-RNase and self-incompatibility in S-RNase-based plants. S-RNase is regarded as inhibitor of self-pollen tube in S-RNase-based self-incompatibility plants. Certain residues like histidine are necessary for RNase activity and self-incompatibility; however, it is unknown whether any other residues contribute to this. Previously, we identified an association between the self-compatible Chinese pear (Pyrus × bretschneideri) cultivar 'Yanzhuang' (YZ) and a mutation causing a residue shift (glycine-to-valine) in the 2nd conserved region (C2) of S21-RNase; however, it was unclear how this nonpolar aliphatic amino acid substitution caused self-compatibility. In this study, we observed that 'YZ' offspring were self-compatible when S21-RNases were all mutated. In vitro pollen tube (S21S21) growth was not completely arrested by the mutated S21-RNase. Residue frequency analysis showed that the glycine residue is highly conserved in diverse S-RNases across many plant species. We therefore generated a mutated petunia SV'-RNase (glycine to valine) and transformed it into S3LS3L petunia. The transformed pistil could not inhibit SV pollen tubes. Three-dimensional protein prediction suggested that the glycine-to-valine mutation alters the spatial structure near the active site, and RNase activity of mutated S-RNase was reducing. Thus, the glycine residue in the C2 is essential for RNase activity, substitution of this residue leads to a failure of self-incompatibility.

Keywords: Conserved residue; Pear; RNase activity; S-RNase mutation; SNP; Self-compatibility.

MeSH terms

  • Catalytic Domain
  • Conserved Sequence
  • Glycine / metabolism
  • Mutation
  • Plant Breeding
  • Pollen Tube
  • Pyrus / genetics*
  • Pyrus / physiology
  • Ribonucleases / genetics*
  • Ribonucleases / metabolism
  • Self-Incompatibility in Flowering Plants* / genetics

Substances

  • Ribonucleases
  • ribonuclease S
  • Glycine