Recent Advances in the Discovery of CK2 Allosteric Inhibitors: From Traditional Screening to Structure-Based Design

Molecules. 2020 Feb 16;25(4):870. doi: 10.3390/molecules25040870.

Abstract

Protein kinase (CK2) has emerged as an attractive cancer therapeutic target and recent efforts have been made to develop its inhibitors. However, the development of selective inhibitors remains challenging because of the highly conserved ATP-binding pocket (orthosteric site) of kinase family. As an alternative strategy, allosteric inhibitors, by targeting the much more diversified allosteric site relative to the conserved ATP-binding site, achieve better pharmacological advantages than orthosteric inhibitors. Traditional serendipitous screening and structure-based design are robust tools for the discovery of CK2 allosteric inhibitors. In this review, we summarize the recent advances in the identification of CK2 allosteric inhibitors. Firstly, we briefly present the CK2 allosteric sites. Then, the allosteric inhibitors targeting the well-elucidated allosteric sites (α/β interface, αD pocket and interface between the Glycine-rich loop and αC-helix) are highlighted in the discovery process and possible binding modes with the allosteric sites are described. This study is expected to provide valuable clues for the design of CK2 allosteric inhibitors.

Keywords: allosteric inhibitors; allosteric site; protein kinase (CK2); traditional screening.

Publication types

  • Review

MeSH terms

  • Allosteric Regulation
  • Allosteric Site / drug effects
  • Amino Acid Sequence
  • Antineoplastic Agents / chemistry*
  • Antineoplastic Agents / pharmacology
  • Biphenyl Compounds / chemistry*
  • Biphenyl Compounds / pharmacology
  • Casein Kinase II / antagonists & inhibitors
  • Casein Kinase II / chemistry
  • Drug Discovery
  • Humans
  • Hydrophobic and Hydrophilic Interactions
  • Kinetics
  • Molecular Docking Simulation
  • Protein Binding
  • Protein Conformation, alpha-Helical
  • Protein Conformation, beta-Strand
  • Protein Interaction Domains and Motifs
  • Protein Kinase Inhibitors / chemistry*
  • Protein Kinase Inhibitors / pharmacology
  • Structure-Activity Relationship
  • Substrate Specificity
  • Thermodynamics

Substances

  • Antineoplastic Agents
  • Biphenyl Compounds
  • CAM4066
  • Protein Kinase Inhibitors
  • CSNK2A1 protein, human
  • Casein Kinase II