The Secretome Profiling of a Pediatric Airway Epithelium Infected with hRSV Identified Aberrant Apical/Basolateral Trafficking and Novel Immune Modulating (CXCL6, CXCL16, CSF3) and Antiviral (CEACAM1) Proteins

Mol Cell Proteomics. 2020 May;19(5):793-807. doi: 10.1074/mcp.RA119.001546. Epub 2020 Feb 19.

Abstract

The respiratory epithelium comprises polarized cells at the interface between the environment and airway tissues. Polarized apical and basolateral protein secretions are a feature of airway epithelium homeostasis. Human respiratory syncytial virus (hRSV) is a major human pathogen that primarily targets the respiratory epithelium. However, the consequences of hRSV infection on epithelium secretome polarity and content remain poorly understood. To investigate the hRSV-associated apical and basolateral secretomes, a proteomics approach was combined with an ex vivo pediatric human airway epithelial (HAE) model of hRSV infection (data are available via ProteomeXchange and can be accessed at https://www.ebi.ac.uk/pride/ with identifier PXD013661). Following infection, a skewing of apical/basolateral abundance ratios was identified for several individual proteins. Novel modulators of neutrophil and lymphocyte activation (CXCL6, CSF3, SECTM1 or CXCL16), and antiviral proteins (BST2 or CEACAM1) were detected in infected, but not in uninfected cultures. Importantly, CXCL6, CXCL16, CSF3 were also detected in nasopharyngeal aspirates (NPA) from hRSV-infected infants but not healthy controls. Furthermore, the antiviral activity of CEACAM1 against RSV was confirmed in vitro using BEAS-2B cells. hRSV infection disrupted the polarity of the pediatric respiratory epithelial secretome and was associated with immune modulating proteins (CXCL6, CXCL16, CSF3) never linked with this virus before. In addition, the antiviral activity of CEACAM1 against hRSV had also never been previously characterized. This study, therefore, provides novel insights into RSV pathogenesis and endogenous antiviral responses in pediatric airway epithelium.

Keywords: CEACAM1; CSF3; CXCL6; Cell secretion; cytokines; host-pathogen interaction; label-free quantification; lung function or biology; mass spectrometry; respiratory syncytial virus; secretome; viruses; well-differentiated pediatric bronchial epithelial cells (WD-PBECs).

MeSH terms

  • Antiviral Agents / metabolism*
  • Bronchi / pathology
  • Cell Line
  • Chemokines / metabolism*
  • Child
  • Epithelial Cells / pathology
  • Epithelial Cells / virology
  • Goblet Cells / metabolism
  • Goblet Cells / virology
  • Homeostasis
  • Humans
  • Infant
  • Kinetics
  • Nasopharynx / virology
  • Proteome / metabolism*
  • Respiratory Mucosa / metabolism
  • Respiratory Mucosa / virology*
  • Respiratory Syncytial Virus Infections / immunology*
  • Respiratory Syncytial Virus Infections / virology*
  • Respiratory Syncytial Virus, Human / growth & development
  • Respiratory Syncytial Virus, Human / physiology*
  • Tropism
  • Viral Proteins / metabolism

Substances

  • Antiviral Agents
  • Chemokines
  • Proteome
  • Viral Proteins