32P-Postlabeling Analysis of DNA Adducts

Methods Mol Biol. 2020:2102:291-302. doi: 10.1007/978-1-0716-0223-2_16.

Abstract

32P-Postlabeling analysis is an ultra-sensitive method for the detection of DNA adducts, such as those formed directly by the covalent binding of carcinogens and mutagens to bases in DNA, and other DNA lesions resulting from modification of bases by endogenous or exogenous agents (e.g., oxidative damage). The procedure involves four main steps: enzymatic digestion of DNA sample; enrichment of the adducts; radiolabeling of the adducts by T4 kinase-catalyzed transference of 32P-orthophosphate from [γ-32P]ATP; chromatographic separation of labeled adducts, and detection and quantification by means of their radioactive decay. Using 10 μg of DNA or less, it is capable of detecting adduct levels as low as 1 adduct in 109-1010 normal nucleotides. It is applicable to a wide range of investigations, including monitoring human exposure to environmental or occupational carcinogens, determining whether a chemical has genotoxic properties, analysis of the genotoxicity of complex mixtures, elucidation of the pathways of activation of carcinogens, and monitoring DNA repair.

Keywords: 32P-postlabeling; Carcinogens; Chemotherapeutic drugs; Complex mixtures; DNA adducts; DNA digestions; DNA repair; Environmental carcinogens; Genotoxicity; HPLC; Mutagens; Nuclease P1; Oxidative damage to DNA; T4 polynucleotide kinase.

MeSH terms

  • Animals
  • Carcinogens / chemistry
  • Carcinogens / toxicity
  • Chromatography, High Pressure Liquid / methods
  • DNA Adducts / analysis*
  • DNA Adducts / chemistry*
  • DNA Adducts / genetics
  • DNA Damage / drug effects
  • Fungal Proteins
  • Humans
  • Isotope Labeling / methods*
  • Mutagens / chemistry
  • Mutagens / toxicity
  • Oxidative Stress / genetics
  • Phosphorus Radioisotopes
  • Phosphotransferases
  • Single-Strand Specific DNA and RNA Endonucleases
  • Workflow

Substances

  • Carcinogens
  • DNA Adducts
  • Fungal Proteins
  • Mutagens
  • Phosphorus Radioisotopes
  • Phosphotransferases
  • Nuclease P1, Penicillium citrinum
  • Single-Strand Specific DNA and RNA Endonucleases