Potassium Ions Enhance Guanine Radical Generation upon Absorption of Low-Energy Photons by G-Quadruplexes and Modify Their Reactivity

J Phys Chem Lett. 2020 Feb 20;11(4):1305-1309. doi: 10.1021/acs.jpclett.9b03667. Epub 2020 Feb 4.

Abstract

G-Quadruplexes are formed by guanine rich DNA/RNA sequences in the presence of metal ions, which occupy the central cavity of these four-stranded structures. We show that these metal ions have a significant effect on the photogeneration and the reactivity of guanine radicals. Transient absorption experiments on G-quadruplexes formed by association of four TGGGGT strands in the presence of K+ reveal that the quantum yield of one-photon ionization at 266 nm (8.1 × 10-3) is twice as high as that determined in the presence of Na+. Replacement of Na+ with K+ also suppresses one reaction path involving deprotonated radicals, (G-H2) → (G-H1) tautomerization. Such behavior shows that the underlying mechanisms are governed by dynamical processes, controlled by the mobility of metal ions, which is higher for Na+ than for K+. These findings may contribute to our understanding of the ultraviolet-induced DNA damage and optimize optoelectronic devices based on four-stranded structures, beyond DNA.

MeSH terms

  • DNA Damage / radiation effects
  • Free Radicals / chemistry
  • Free Radicals / metabolism
  • G-Quadruplexes*
  • Guanine / chemistry*
  • Ions / chemistry
  • Magnetic Resonance Spectroscopy
  • Models, Molecular
  • Photons
  • Potassium / chemistry*
  • Quantum Theory
  • Ultraviolet Rays

Substances

  • Free Radicals
  • Ions
  • Guanine
  • Potassium