Microbial growth rates and local external mass transfer coefficients in a porous bed biofilm system measured by 19 F magnetic resonance imaging of structure, oxygen concentration, and flow velocity

Biotechnol Bioeng. 2020 May;117(5):1458-1469. doi: 10.1002/bit.27275. Epub 2020 Feb 5.

Abstract

19 F nuclear magnetic resonance (NMR) oximetry and 1 H NMR velocimetry were used to noninvasively map oxygen concentrations and hydrodynamics in space and time in a model packed bed biofilm system in the presence and absence of flow. The development of a local oxygen sink associated with a single gel bead inoculated with respiring Escherichia coli was analyzed with a phenomenological model to determine the specific growth rate of the bacteria in situ, returning a value (0.66 hr-1 ) that was close to that measured independently in planktonic culture (0.62 hr-1 ). The decay of oxygen concentration in and around the microbiologically active bead was delayed and slower in experiments conducted under continuous flow in comparison to no-flow experiments. Concentration boundary layer thicknesses were determined and Sherwood numbers calculated to quantify external mass transfer resistance. Boundary layers were thicker in no-flow experiments compared to experiments with flow. Whereas the oxygen concentration profile across a reactive biofilm particle was symmetric in no-flow experiments, it was asymmetric with respect to flow direction in flow experiments with Sherwood numbers on the leading edge (Sh = 7) being larger than the trailing edge (Sh = 3.5). The magnitude of the experimental Sh was comparable to values predicted by a variety of correlations. These spatially resolved measurements of oxygen distribution in a geometrically complex model reveal in innovative detail the local coupling between microbial growth, oxygen consumption, and external mass transfer.

Keywords: MRI; Sherwood number; biofilms; boundary layer; oximetry.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Biofilms*
  • Biotechnology / methods*
  • Escherichia coli / metabolism
  • Fluorine / analysis
  • Fluorine / metabolism
  • Magnetic Resonance Spectroscopy / methods*
  • Oxygen* / analysis
  • Oxygen* / metabolism
  • Porosity
  • Rheology

Substances

  • Fluorine
  • Oxygen