Refining critical regions in 15q24 microdeletion syndrome pertaining to autism

Am J Med Genet B Neuropsychiatr Genet. 2020 Jun;183(4):217-226. doi: 10.1002/ajmg.b.32778. Epub 2020 Jan 18.

Abstract

Chromosome 15q24 microdeletion syndrome is characterized by developmental delay, facial dysmorphism, hearing loss, hypotonia, recurrent infection, and other congenital malformations including microcephaly, scoliosis, joint laxity, digital anomalies, as well as sometimes having autism spectrum disorder (ASD) and attention deficit hyperactivity disorder. Here, we report a boy with a 2.58-Mb de novo deletion at chromosome 15q24. He is diagnosed with ASD and having multiple phenotypes similar to those reported in cases having 15q24 microdeletion syndrome. To delineate the critical genes and region that might be responsible for these phenotypes, we reviewed all previously published cases. We observe a potential minimum critical region of 650 kb (LCR15q24A-B) affecting NEO1 among other genes that might pertinent to individuals with ASD carrying this deletion. In contrast, a previously defined minimum critical region downstream of the 650-kb interval (LCR15q24B-D) is more likely associated with the developmental delay, facial dysmorphism, recurrent infection, and other congenital malformations. As a result, the ASD phenotype in this individual is potentially attributed by genes particularly NEO1 within the newly proposed critical region.

Keywords: 15q24 microdeletion; autism spectrum disorder; critical region; de novo.

Publication types

  • Case Reports
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Autism Spectrum Disorder / genetics*
  • Child, Preschool
  • Chromosome Deletion
  • Chromosome Disorders / genetics*
  • Chromosomes, Human, Pair 15 / genetics
  • Congenital Abnormalities / genetics
  • Fingers / abnormalities*
  • Gene Deletion
  • Gene Dosage
  • Genetic Variation
  • Humans
  • Intellectual Disability / genetics*
  • Joint Instability / complications
  • Male
  • Microcephaly / genetics
  • Oligonucleotide Array Sequence Analysis
  • Phenotype
  • Polymorphism, Single Nucleotide*
  • Scoliosis / genetics

Supplementary concepts

  • 15q24 Microdeletion