The best CRISPR/Cas9 versus RNA interference approaches for Arabinogalactan proteins' study

Mol Biol Rep. 2020 Mar;47(3):2315-2325. doi: 10.1007/s11033-020-05258-0. Epub 2020 Jan 16.

Abstract

Arabinogalactan Proteins (AGPs) are hydroxyproline-rich proteins containing a high proportion of carbohydrates, widely spread in the plant kingdom. AGPs have been suggested to play important roles in plant development processes, especially in sexual plant reproduction. Nevertheless, the functions of a large number of these molecules, remains to be discovered. In this review, we discuss two revolutionary genetic techniques that are able to decode the roles of these glycoproteins in an easy and efficient way. The RNA interference is a frequently technique used in plant biology that promotes genes silencing. The Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)-associated protein 9 (CRISPR/Cas9), emerged a few years ago as a revolutionary genome-editing technique that has allowed null mutants to be obtained in a wide variety of organisms, including plants. The two techniques have some differences between them and depending on the research objective, these may work as advantage or disadvantage. In the present work, we propose the use of the two techniques to obtain AGP mutants easily and quickly, helping to unravel the role of AGPs, surely a great asset for the future.

Keywords: Arabinogalactan proteins; CRISPR/Cas9; Mutants; Plant genome engineering; RNA interference.

Publication types

  • Review

MeSH terms

  • Animals
  • CRISPR-Cas Systems*
  • Gene Editing*
  • Gene Expression Regulation*
  • Gene Silencing
  • Gene Targeting
  • Humans
  • Mucoproteins / genetics*
  • Mucoproteins / metabolism
  • Plant Proteins / genetics
  • Plant Proteins / metabolism
  • RNA Interference*
  • RNA, Small Interfering / genetics
  • Research

Substances

  • Mucoproteins
  • Plant Proteins
  • RNA, Small Interfering
  • arabinogalactan proteins