Antibacterial effect of indene on Helicobacter pylori correlates with specific interaction between its compound and dimyristoyl-phosphatidylethanolamine

Chem Phys Lipids. 2020 Mar:227:104871. doi: 10.1016/j.chemphyslip.2020.104871. Epub 2020 Jan 7.

Abstract

Recent studies by our group have suggested that the vitamin D3 decomposition product VDP1 [(1R,3aR,7aR)-1-[(1R)-1,5-dimethylhexyl]octahydro-7a-methyl-4H-inden-4-one] confers the potent bactericidal action to Helicobacter pylori by targeting the membranal dimyristoyl-phosphatidylethanolamine (di-14:0 PE). In this study we synthesized a new VDP1 derivative to advance further investigation as for the correlative relationship between VDP1 structure and anti-H. pylori activity or PE vesicle collapse induction activity. The derivative VD3-7 [(1R,7aR)-4-fluoro-7a-methyl-1-((R)-6-methylheptan-2-yl)octahydro-1H-indene] retained a fluorine atom in place of the oxygen atom of VDP1. The fluorination of the carbonyl portion of VDP1 forfeited the effective anti-H. pylori activity. We, therefore, prepared Coomassie brilliant blue (CBB)-containing unilamellar vesicles consisting of various PE molecular species, and examined the vesicle collapse induction activity of either VDP1 or VD3-7 by detecting the CBB eluted from the PE unilamellar vesicles. VDP1 strongly induced CBB elution from the unilamellar vesicles of rectus-PE retaining the same two fatty acid side-chains shorter than carbon numbers 14, indicating that VDP1 specifically disrupted the vesicular conformation of those PE unilamellar vesicles. Meanwhile, VD3-7 had no influence on the structural stability of any PE unilamellar vesicles. This study obtained additional evidence that VDP1 acts as a bactericidal agent on H. pylori by targeting the membranal di-14:0 PE.

Keywords: Helicobacter pylori; Indene; Myristic acid; Phosphatidylethanolamine; Vitamin D.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anti-Bacterial Agents / chemistry
  • Anti-Bacterial Agents / metabolism
  • Anti-Bacterial Agents / pharmacology*
  • Cholecalciferol / analogs & derivatives
  • Cholecalciferol / metabolism
  • Cholecalciferol / pharmacology
  • Helicobacter pylori / drug effects
  • Helicobacter pylori / metabolism*
  • Indenes / chemistry*
  • Indenes / metabolism
  • Indenes / pharmacology
  • Isomerism
  • Phosphatidylethanolamines / chemical synthesis
  • Phosphatidylethanolamines / chemistry
  • Phosphatidylethanolamines / metabolism*
  • Structure-Activity Relationship

Substances

  • Anti-Bacterial Agents
  • Indenes
  • Phosphatidylethanolamines
  • Cholecalciferol
  • indene