NXF1 and CRM1 nuclear export pathways orchestrate nuclear export, translation and packaging of murine leukaemia retrovirus unspliced RNA

RNA Biol. 2020 Apr;17(4):528-538. doi: 10.1080/15476286.2020.1713539. Epub 2020 Jan 23.

Abstract

Cellular mRNAs are exported from the nucleus as fully spliced RNAs. Proofreading mechanisms eliminate unprocessed and irregular pre-mRNAs to control the quality of gene expression. Retroviruses need to export partially spliced and unspliced full-length RNAs to the cytoplasm where they serve as templates for protein synthesis and/or as encapsidated RNA in progeny viruses. Genetically complex retroviruses such as HIV-1 use Rev-equivalent proteins to export intron-retaining RNA from the nucleus using the cellular CRM1-driven nuclear export machinery. By contrast, genetically simpler retroviruses such as murine leukaemia virus (MLV) recruit the NXF1 RNA export machinery. In this study, we reveal for the first time that MLV hijacks both NXF1 and CRM1-dependent pathways to achieve optimal replication capacity. The CRM1-pathway marks the MLV full-length RNA (FL RNA) for packaging, while NXF1-driven nuclear export is coupled to translation. Thus, the cytoplasmic function of the viral RNA is determined early in the nucleus. Depending on the nature of ribonucleoprotein complex formed on FL RNA cargo in the nucleus, the FL RNA will be addressed to the translation machinery sites or to the virus-assembly sites at the plasma membrane.

Keywords: CRM1; MLV; NXF1/Tap; RNA; export; packaging; retrovirus; trafficking.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Active Transport, Cell Nucleus
  • Animals
  • Cell Nucleus / metabolism
  • Cell Nucleus / virology*
  • Cytoplasm / metabolism
  • Cytoplasm / virology*
  • Exportin 1 Protein
  • Karyopherins / metabolism*
  • Leukemia Virus, Murine / physiology*
  • Leukemia, Experimental
  • Mice
  • NIH 3T3 Cells
  • Nucleocytoplasmic Transport Proteins / metabolism*
  • Protein Biosynthesis
  • RNA, Viral / physiology
  • Receptors, Cytoplasmic and Nuclear / metabolism*
  • Retroviridae Infections
  • Tumor Virus Infections
  • Viral Genome Packaging

Substances

  • Karyopherins
  • NXF1 protein, mouse
  • Nucleocytoplasmic Transport Proteins
  • RNA, Viral
  • Receptors, Cytoplasmic and Nuclear

Grants and funding

This work was supported by institutional grants of the CNRS, the University of Montpellier and the Ligue Régionale contre le Cancer.