Isolation and characterization of kelch repeat-containing F-box proteins from colored wheat

Mol Biol Rep. 2020 Feb;47(2):1129-1141. doi: 10.1007/s11033-019-05210-x. Epub 2020 Jan 6.

Abstract

F-box proteins play important roles in the regulation of various developmental processes in plants. Approximately 1796 F-box genes have been identified in the wheat genome, but details of their functions remain unknown. Moreover, not much was known about the roles of kelch repeat domain-containing F-box genes (TaKFBs) in wheat. In the present study, we isolated five TaKFBs to investigate the roles of KFBs at different stages of colored wheat grain development. The cDNAs encoding TaKFB1, TaKFB2, TaKFB3, TaKFB4, and TaKFB5 contained 363, 449, 353, 382, and 456 bp open reading frames, respectively. All deduced TaKFBs contained an F-box domain (IPR001810) and a kelch repeat type 1 domain (IPR006652), except TaKFB2. Expression of TaKFBs was elevated during the pigmentation stages of grain development. To clarify how TaKFB and SKP interact in wheat, we investigated whether five TaKFB proteins showed specificity for six SKP proteins using a yeast two-hybrid (Y2H) assay. An Y2H screen was performed to search for proteins capable of binding the TaKFBs and interaction was identified between TaKFB1 and aquaporin PIP1. To examine the subcellular localization of TaKFBs, we transiently expressed TaKFB-green fluorescent protein (GFP) fusions in tobacco leaves; the TaKFB-GFP fusions were detected in the nucleus and the cytoplasm. Y2H and bimolecular fluorescence complementation (BiFC) assays revealed that TaKFB1 specifically interacts with aquaporin PIP1. These results will provide useful information for further functional studies on wheat F-box proteins and their possible roles.

Keywords: F-box protein; Grain development; Kelch repeat; TaKFB; Wheat; Yeast two-hybrid.

MeSH terms

  • Amino Acid Sequence
  • Cloning, Molecular*
  • F-Box Proteins / chemistry*
  • F-Box Proteins / genetics*
  • F-Box Proteins / metabolism
  • Kelch Repeat*
  • Plant Proteins / chemistry
  • Plant Proteins / genetics
  • Plant Proteins / metabolism
  • Proteasome Endopeptidase Complex / metabolism
  • Protein Binding
  • Protein Transport
  • Proteolysis
  • Sequence Analysis, DNA
  • Triticum / genetics*
  • Triticum / metabolism

Substances

  • F-Box Proteins
  • Plant Proteins
  • Proteasome Endopeptidase Complex
  • ATP dependent 26S protease