Plasma proteome profiling of freshwater and seawater life stages of rainbow trout (Oncorhynchus mykiss)

PLoS One. 2020 Jan 3;15(1):e0227003. doi: 10.1371/journal.pone.0227003. eCollection 2020.

Abstract

The sea-run phenotype of rainbow trout (Oncorhynchus mykiss), like other anadromous salmonids, present a juvenile stage fully adapted to life in freshwater known as parr. Development in freshwater is followed by the smolt stage, where preadaptations needed for seawater life are developed making fish ready to migrate to the ocean, after which event they become post-smolts. While these three life stages have been studied using a variety of approaches, proteomics has never been used for such purpose. The present study characterised the blood plasma proteome of parr, smolt and post-smolt rainbow trout using a gel electrophoresis liquid chromatography tandem mass spectrometry approach alone or in combination with low-abundant protein enrichment technology (combinatorial peptide ligand library). In total, 1,822 proteins were quantified, 17.95% of them being detected only in plasma post enrichment. Across all life stages, the most abundant proteins were ankyrin-2, DNA primase large subunit, actin, serum albumin, apolipoproteins, hemoglobin subunits, hemopexin-like proteins and complement C3. When comparing the different life stages, 17 proteins involved in mechanisms to cope with hyperosmotic stress and retinal changes, as well as the downregulation of nonessential processes in smolts, were significantly different between parr and smolt samples. On the other hand, 11 proteins related to increased growth in post-smolts, and also related to coping with hyperosmotic stress and to retinal changes, were significantly different between smolt and post-smolt samples. Overall, this study presents a series of proteins with the potential to complement current seawater-readiness assessment tests in rainbow trout, which can be measured non-lethally in an easily accessible biofluid. Furthermore, this study represents a first in-depth characterisation of the rainbow trout blood plasma proteome, having considered three life stages of the fish and used both fractionation alone or in combination with enrichment methods to increase protein detection.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Fish Proteins / analysis
  • Fresh Water
  • Life Cycle Stages*
  • Oncorhynchus mykiss / growth & development*
  • Plasma / chemistry*
  • Proteome / metabolism*
  • Proteomics / methods
  • Seawater

Substances

  • Fish Proteins
  • Proteome

Grants and funding

This work was supported by the Regionale Foskningsfond Vestalandet project: Utvikling av en sesonguavhengig protokoll for intensiv produksjon av regnbueørret (O. mykiss) (Development of a season independent protocol for the intensive production of rainbow trout (O. mykiss)) (RFFVest project 248020), the CtrlAQUA SFI, Centre for Closed-Containment Aquaculture programme (SFI project 237856), and by Japan Society for the Promotion of Science Bilateral Joint Research Project (Open Partnership with Norway). This work also received funding from the MASTS pooling initiative (The Marine Alliance for Science and Technology for Scotland; grant SASG9) and their support is gratefully acknowledged. MASTS is funded by the Scottish Funding Council (grant reference HR09011) and contributing institutions.