From behavior to circuit modeling of light-seeking navigation in zebrafish larvae

Elife. 2020 Jan 2:9:e52882. doi: 10.7554/eLife.52882.

Abstract

Bridging brain-scale circuit dynamics and organism-scale behavior is a central challenge in neuroscience. It requires the concurrent development of minimal behavioral and neural circuit models that can quantitatively capture basic sensorimotor operations. Here, we focus on light-seeking navigation in zebrafish larvae. Using a virtual reality assay, we first characterize how motor and visual stimulation sequences govern the selection of discrete swim-bout events that subserve the fish navigation in the presence of a distant light source. These mechanisms are combined into a comprehensive Markov-chain model of navigation that quantitatively predicts the stationary distribution of the fish's body orientation under any given illumination profile. We then map this behavioral description onto a neuronal model of the ARTR, a small neural circuit involved in the orientation-selection of swim bouts. We demonstrate that this visually-biased decision-making circuit can capture the statistics of both spontaneous and contrast-driven navigation.

Keywords: animal behavior; computational biology; decision-making; neural circuit models; neuroscience; phototaxis; systems biology; zebrafish.

MeSH terms

  • Animals
  • Behavior, Animal / physiology*
  • Behavior, Animal / radiation effects*
  • Biomechanical Phenomena
  • Larva / physiology
  • Light*
  • Locomotion / physiology*
  • Markov Chains
  • Models, Biological
  • Neurons / physiology
  • Orientation
  • Photic Stimulation
  • Phototaxis / radiation effects
  • Zebrafish / physiology*

Associated data

  • Dryad/10.5061/dryad.v9s4mw6qx