Detection of Epidermal Growth Factor Receptor Gene Status via a DNA Electrochemical Biosensor Based on Lambda Exonuclease-assisted Signal Amplification

Anal Sci. 2020 Jun 10;36(6):697-701. doi: 10.2116/analsci.19P422. Epub 2019 Dec 20.

Abstract

Based on our previous work, we have constructed a new electrochemical biosensor to detect epidermal growth factor receptor (EGFR) gene mutation, which was a significant therapeutic effect predictor of target drugs for non-small cell lung cancer. In order to lower the detection limit to detect the small amount of EGFR gene status, we have employed lambda exonuclease (λ-Exo) to form a hybridization-digestion cycle. The reaction stages are depicted as follows: the target DNA hybridized with auxiliary DNA which had been modified with the λ-Exo recognition site; then, the double strands were cleaved by λ-Exo. The target DNA was released completely, and continued to hybridize with remaining auxiliary DNA, which formed a recycle for target reutilization. Finally, we detected the remaining auxiliary DNA to evaluate the amount or status of the EGFR gene. The reutilization of target DNA will help to achieve an enlarged signal with a small amount of target DNA, and the detection limit of the biosensor decreased down to 10 pM. Meanwhile, our assay can differentiate wild genes from the mutational gene of EGFR with excellent specificity. Our signal amplification method provides a research foundation for the detection system of the electrochemical biosensor by employing exonuclease, and impels the biosensor to be developed as a suitable method for EGFR detection in clinical applications.

Keywords: DNA electrochemical biosensor; epidermal growth factor receptor; hybridization–digestion cycles; lambda exonuclease; signal amplification.

MeSH terms

  • Biosensing Techniques*
  • Carcinoma, Non-Small-Cell Lung / genetics*
  • Carcinoma, Non-Small-Cell Lung / metabolism
  • DNA, Neoplasm / chemistry*
  • DNA, Neoplasm / metabolism
  • Electrochemical Techniques*
  • ErbB Receptors / genetics
  • ErbB Receptors / metabolism
  • Exodeoxyribonucleases / metabolism*
  • Humans
  • Lung Neoplasms / genetics*
  • Lung Neoplasms / metabolism
  • Mutation
  • Nucleic Acid Hybridization

Substances

  • DNA, Neoplasm
  • EGFR protein, human
  • ErbB Receptors
  • Exodeoxyribonucleases