Structure of the Cardiac Sodium Channel

Cell. 2020 Jan 9;180(1):122-134.e10. doi: 10.1016/j.cell.2019.11.041. Epub 2019 Dec 19.

Abstract

Voltage-gated sodium channel Nav1.5 generates cardiac action potentials and initiates the heartbeat. Here, we report structures of NaV1.5 at 3.2-3.5 Å resolution. NaV1.5 is distinguished from other sodium channels by a unique glycosyl moiety and loss of disulfide-bonding capability at the NaVβ subunit-interaction sites. The antiarrhythmic drug flecainide specifically targets the central cavity of the pore. The voltage sensors are partially activated, and the fast-inactivation gate is partially closed. Activation of the voltage sensor of Domain III allows binding of the isoleucine-phenylalanine-methionine (IFM) motif to the inactivation-gate receptor. Asp and Ala, in the selectivity motif DEKA, line the walls of the ion-selectivity filter, whereas Glu and Lys are in positions to accept and release Na+ ions via a charge-delocalization network. Arrhythmia mutation sites undergo large translocations during gating, providing a potential mechanism for pathogenic effects. Our results provide detailed insights into Nav1.5 structure, pharmacology, activation, inactivation, ion selectivity, and arrhythmias.

Keywords: antiarrhytymic drugs; cryoelectron microscopy arrhythmia; fast inactivation; gating pore current; heart; sodium channel; sodium selectivity.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Line
  • HEK293 Cells
  • Heart / physiology
  • Humans
  • Ion Channel Gating / physiology
  • Membrane Potentials / physiology
  • NAV1.5 Voltage-Gated Sodium Channel / genetics*
  • NAV1.5 Voltage-Gated Sodium Channel / metabolism*
  • NAV1.5 Voltage-Gated Sodium Channel / ultrastructure*
  • Patch-Clamp Techniques / methods
  • Rats
  • Sodium / metabolism
  • Sodium Channels / chemistry
  • Structure-Activity Relationship
  • Voltage-Gated Sodium Channels / metabolism
  • Voltage-Gated Sodium Channels / ultrastructure

Substances

  • NAV1.5 Voltage-Gated Sodium Channel
  • Scn5a protein, rat
  • Sodium Channels
  • Voltage-Gated Sodium Channels
  • Sodium