Stimulation of adventitious root formation by the oligosaccharin OSRG at the transcriptome level

Plant Signal Behav. 2020;15(1):1703503. doi: 10.1080/15592324.2019.1703503. Epub 2019 Dec 18.

Abstract

Oligosaccharins, which are biologically active oligosaccharide fragments of cell wall polysaccharides, may regulate the processes of growth and development as well as the response to stress factors. We characterized the effect of the oligosaccharin that stimulates rhizogenesis (OSRG) on the gene expression profile in the course of IAA-induced formation of adventitious roots in hypocotyl explants of buckwheat (Fagopyrum esculentum Moench.). The transcriptomes at two stages of IAA-induced root primordium formation (6 h and 24 h after induction) were compared after either treatment with auxin alone or joint treatment with auxin and OSRG. The set of differentially expressed genes indicated the special importance of oligosaccharin at the early stage of auxin-induced adventitious root formation. The list of genes with altered mRNA abundance in the presence of oligosaccharin included those, which Arabidopsis homologs encode proteins directly involved in the response to auxin as well as proteins that contribute to redox regulation, detoxification of various compounds, vesicle trafficking, and cell wall modification. The obtained results contribute to understanding the mechanism of adventitious root formation and demonstrate that OSRG is involved in fine-tuning of ROS and auxin regulatory modes involved in root development.

Keywords: Adventitious roots; auxin; buckwheat; oligosaccharin; transcriptome.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabidopsis / genetics
  • Arabidopsis / metabolism
  • Arabidopsis Proteins / genetics*
  • Arabidopsis Proteins / metabolism*
  • Gene Expression Regulation, Plant / physiology
  • Hypocotyl / metabolism
  • Oxidation-Reduction
  • Transcriptome / genetics*

Substances

  • Arabidopsis Proteins

Grants and funding

This work was partially supported by the Russian Foundation for Basic Research (grant 17-04-01539, isolation and characterization of OSRG, transcriptome analysis) and by Russian Science Foundation (grant 18-76-10018, expression data analysis). The part of work (data interpretation) was performed by Larskaya I., Gorshkov O., Mokshina N., Trofimova O., Mikshina P., Gogoleva N, and Gorshkova T. at financial support from the government assignment for FRC Kazan Scientific Center of RAS. The study was carried out on the equipment of the CSF-SAC FRC KSC RAS.