A novel loop-mediated isothermal amplification method for identification of four body fluids with smartphone detection

Forensic Sci Int Genet. 2020 Mar:45:102195. doi: 10.1016/j.fsigen.2019.102195. Epub 2019 Nov 23.

Abstract

Messenger RNA profiling for body fluid identification (bfID) is a useful approach to collect contextual information associated with a crime. Current methods require costly fluorescent probes, lengthy amplification protocols and/or time-consuming sample preparation. To simplify this process, we developed a bfID method that has the potential to be rapid in analysis time, inexpensive and fluorescence-free, combining a universal operating procedure with a high-throughout (microwell plate) platform for simultaneous detection of mRNA markers from whole blood, semen, saliva, and vaginal fluid. Full bfID sample preparation and analysis of 23 samples was completed in under 3 h using smart phone optical detection and analysis and show efficacy of the method in a validated blind study. The results provide an efficient, sensitive and specific approach to supplement the current biochemical tests in a forensic laboratory.

Keywords: Body fluid identification; Forensic testing; LAMP.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Biomarkers / metabolism
  • Blood / metabolism*
  • Cervix Mucus / metabolism*
  • Female
  • Forensic Genetics / methods
  • Globins / genetics
  • Globins / metabolism
  • Histatins / genetics
  • Histatins / metabolism
  • Humans
  • Image Processing, Computer-Assisted
  • Male
  • Molecular Diagnostic Techniques / methods*
  • Nucleic Acid Amplification Techniques / methods*
  • RNA, Messenger / metabolism*
  • Saliva / metabolism*
  • Semen / metabolism*
  • Seminal Vesicle Secretory Proteins / genetics
  • Seminal Vesicle Secretory Proteins / metabolism
  • Sensitivity and Specificity
  • Smartphone*
  • beta-Defensins / genetics
  • beta-Defensins / metabolism

Substances

  • Biomarkers
  • HTN3 protein, human
  • Histatins
  • RNA, Messenger
  • Seminal Vesicle Secretory Proteins
  • beta-Defensins
  • seminal vesicle-specific antigen
  • Globins

Supplementary concepts

  • LAMP assay