Unveiling the genetic etiology of primary ciliary dyskinesia: When standard genetic approach is not enough

Adv Med Sci. 2020 Mar;65(1):1-11. doi: 10.1016/j.advms.2019.10.003. Epub 2019 Dec 10.

Abstract

Purpose: Primary ciliary dyskinesia (PCD) is a ciliopathy caused by dysfunction of motile cilia. As there is still no standard PCD diagnostics, the final diagnosis requires a combination of several tests. The genetic screening is a hallmark for the final diagnosis and requires high-throughput techniques, such as whole-exome sequencing (WES). Nevertheless, WES has limitations that may prevent a definitive genetic diagnosis. Here we present a case that demonstrates how the PCD genetic diagnosis may not be trivial.

Materials/methods: A child with PCD and situs inversus totalis (designated as Kartagener syndrome (KS)) was subjected to clinical assessments, ultrastructural analysis of motile cilia, extensive genetic evaluation by WES and chromosomal array analysis, bioinformatic analysis, gene expression analysis and immunofluorescence to identify the genetic etiology. His parents and sister, as well as healthy controls were also evaluated.

Results: Here we show that a disease-causing variant in the USP11 gene and copy number variations in CRHR1 and KRT34 genes may be involved in the patient PCD phenotype. None of these genes were previously reported in PCD patients and here we firstly show its presence and immunolocalization in respiratory cells.

Conclusions: This work highlights how the genetic diagnosis can turn to be rather complex and that combining several approaches may be needed. Overall, our results contribute to increase the understanding of the genetic factors involved in the pathophysiology of PCD/KS, which is of paramount importance to assist the current diagnosis and future development of newer therapies.

Keywords: Chromosomal array analysis; Cilia; Primary ciliary dyskinesia; Situs inversus; Whole-exome sequencing.

Publication types

  • Case Reports

MeSH terms

  • Child, Preschool
  • Cilia / metabolism
  • Cilia / pathology
  • DNA Copy Number Variations
  • Female
  • Genetic Testing
  • Humans
  • Kartagener Syndrome / etiology*
  • Kartagener Syndrome / pathology
  • Keratins, Hair-Specific / genetics*
  • Keratins, Type I / genetics*
  • Male
  • Mutation*
  • NADPH Oxidase 2 / genetics
  • Pedigree
  • Phenotype
  • Receptors, Corticotropin-Releasing Hormone / genetics*
  • Thiolester Hydrolases / genetics*

Substances

  • KRT34 protein, human
  • Keratins, Hair-Specific
  • Keratins, Type I
  • Receptors, Corticotropin-Releasing Hormone
  • USP11 protein, human
  • CRF receptor type 1
  • CYBB protein, human
  • NADPH Oxidase 2
  • Thiolester Hydrolases