Probing Structure and Reaction Dynamics of Proteins Using Time-Resolved Resonance Raman Spectroscopy

Chem Rev. 2020 Apr 8;120(7):3577-3630. doi: 10.1021/acs.chemrev.9b00429. Epub 2019 Dec 9.

Abstract

The mechanistic understanding of protein functions requires insight into the structural and reaction dynamics. To elucidate these processes, a variety of experimental approaches are employed. Among them, time-resolved (TR) resonance Raman (RR) is a particularly versatile tool to probe processes of proteins harboring cofactors with electronic transitions in the visible range, such as retinal or heme proteins. TR RR spectroscopy offers the advantage of simultaneously providing molecular structure and kinetic information. The various TR RR spectroscopic methods can cover a wide dynamic range down to the femtosecond time regime and have been employed in monitoring photoinduced reaction cascades, ligand binding and dissociation, electron transfer, enzymatic reactions, and protein un- and refolding. In this account, we review the achievements of TR RR spectroscopy of nearly 50 years of research in this field, which also illustrates how the role of TR RR spectroscopy in molecular life science has changed from the beginning until now. We outline the various methodological approaches and developments and point out current limitations and potential perspectives.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Animals
  • Bacteria / chemistry
  • Bacteriorhodopsins / chemistry*
  • Heme / chemistry
  • Hemeproteins / chemistry*
  • Humans
  • Retinaldehyde / chemistry
  • Spectrum Analysis, Raman / methods
  • Vibration

Substances

  • Hemeproteins
  • Heme
  • Bacteriorhodopsins
  • Retinaldehyde