Adenovirus in the omics era - a multipronged strategy

FEBS Lett. 2020 Jun;594(12):1879-1890. doi: 10.1002/1873-3468.13710. Epub 2020 Jan 26.

Abstract

Human adenoviruses (HAdVs) are common pathogens associated with a wide variety of respiratory, ocular, and gastrointestinal diseases. To achieve its effective lytic mode of replication, HAdVs have to reprogram host-cell gene expression and fine-tune viral gene expression in a temporal manner. In two decades, omics revolution has advanced our knowledge about the HAdV and host-cell interplay at the RNA and protein levels. This review summarizes the current knowledge from large-scale datasets on how HAdV infections adjust coding and noncoding RNA expression, as well as how they reprogram host-cell proteome during the lytic course of infection.

Keywords: HAdV infection; RNA-Seq; SILAC-MS; lncRNA; miRNA; mivaRNA; proteomics; regulation of host-cell gene expression; transcriptomics; virus-host interaction.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Adenovirus Infections, Human / genetics*
  • Adenovirus Infections, Human / metabolism
  • Adenoviruses, Human / pathogenicity
  • Adenoviruses, Human / physiology*
  • Gene Expression Profiling / methods*
  • Host-Pathogen Interactions / genetics
  • Humans
  • Proteomics / methods*