Detection of 8-oxoguanine and apurinic/apyrimidinic sites using a fluorophore-labeled probe with cell-penetrating ability

BMC Mol Cell Biol. 2019 Nov 27;20(1):54. doi: 10.1186/s12860-019-0236-x.

Abstract

Background: Reactive oxygen species (ROS) produce different lesions in DNA by ROS-induced DNA damage. Detection and quantification of 8-oxo-7,8-dihydroguanine (8-oxoG) within cells are important for study. Human ribosomal protein S3 (hRpS3) has a high binding affinity to 8-oxoG. In this study, we developed an imaging probe to detect 8-oxoG using a specific peptide from hRpS3. Transactivator (TAT) proteins are known to have cell-penetrating properties. Therefore, we developed a TAT-S3 probe by attaching a TAT peptide to our imaging probe.

Results: A DNA binding assay was conducted to confirm that our probe bound to 8-oxoG and apurinic/apyrimidinic (AP) sites. We confirmed that the TAT-S3 probe localized in the mitochondria, without permeabilization, and fluoresced in H2O2-treated HeLa cells and zebrafish embryos. Treatment with Mitoquinone (MitoQ), a mitochondria-targeted antioxidant, reduced TAT-S3 probe fluorescence. Additionally, treatment with O8, an inhibitor of OGG1, increased probe fluorescence. A competition assay was conducted with an aldehyde reaction probe (ARP) and methoxyamine (MX) to confirm binding of TAT-S3 to the AP sites. The TAT-S3 probe showed competitive binding to AP sites with ARP and MX.

Conclusions: These results revealed that the TAT-S3 probe successfully detected the presence of 8-oxoG and AP sites in damaged cells. The TAT-S3 probe may have applications for the detection of diseases caused by reactive oxygen species.

Keywords: 8-oxo-7,8-dihydroguanine (8-oxoG); Apurinic/apyrimidinic (AP) site; Human ribosomal protein S3 (hRpS3); Transactivator (TAT) proteins.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Binding Sites
  • DNA / analysis*
  • DNA / chemistry
  • DNA Damage
  • DNA, Mitochondrial
  • DNA-(Apurinic or Apyrimidinic Site) Lyase / analysis
  • DNA-(Apurinic or Apyrimidinic Site) Lyase / chemistry
  • Flow Cytometry
  • Fluorescent Dyes* / chemical synthesis
  • Guanine / analogs & derivatives*
  • Guanine / analysis
  • Guanine / metabolism
  • HeLa Cells
  • Humans
  • Microscopy, Confocal
  • Mitochondria / pathology
  • Protein Binding
  • Ribosomal Proteins / chemistry
  • Ribosomal Proteins / metabolism
  • Trans-Activators / chemistry
  • Zebrafish

Substances

  • DNA, Mitochondrial
  • Fluorescent Dyes
  • RPS3 protein, human
  • Ribosomal Proteins
  • Trans-Activators
  • 8-hydroxyguanine
  • Guanine
  • DNA
  • DNA-(Apurinic or Apyrimidinic Site) Lyase