PMP-diketopiperazine adducts form at the active site of a PLP dependent enzyme involved in formycin biosynthesis

Chem Commun (Camb). 2019 Nov 28;55(96):14502-14505. doi: 10.1039/c9cc06975e.

Abstract

ForI is a PLP-dependent enzyme from the biosynthetic pathway of the C-nucleoside antibiotic formycin. Cycloserine is thought to inhibit PLP-dependent enzymes by irreversibly forming a PMP-isoxazole. We now report that ForI forms novel PMP-diketopiperazine derivatives following incubation with both d and l cycloserine. This unexpected result suggests chemical diversity in the chemistry of cycloserine inhibition.

MeSH terms

  • Bacterial Proteins / antagonists & inhibitors
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism*
  • Biocatalysis
  • Catalytic Domain
  • Cycloserine / chemistry
  • Diketopiperazines / chemistry*
  • Diketopiperazines / metabolism
  • Formycins / biosynthesis*
  • Formycins / chemistry
  • Hydrogen-Ion Concentration
  • Pyridoxal Phosphate / chemistry*
  • Pyridoxamine / analogs & derivatives*
  • Pyridoxamine / chemistry
  • Pyridoxamine / metabolism
  • Streptomyces / chemistry
  • Streptomyces / metabolism
  • Transaminases / antagonists & inhibitors
  • Transaminases / genetics
  • Transaminases / metabolism*

Substances

  • Bacterial Proteins
  • Diketopiperazines
  • Formycins
  • Pyridoxal Phosphate
  • Pyridoxamine
  • formycin
  • Cycloserine
  • Transaminases
  • pyridoxamine phosphate