A haplotype-specific linkage disequilibrium pattern of monoamine oxidase A gene associated with regular smoking in women

J Gene Med. 2019 Dec;21(12):e3142. doi: 10.1002/jgm.3142. Epub 2019 Dec 17.

Abstract

Background: Cigarette smoking in women is raising a public health problem. The X-linked monoamine oxidase A (MAOA) was considered as a susceptibility gene to substance abuse of tobacco, but the evolutionary effect of MAOA may lead to a positive or negative association between genetic variations and smoking development among study regions.

Methods: Based on linkage disequilibrium (LD), we performed a haplotype-based association to explore the effect of MAOA gene on women's smoking risk in a case-control study.

Results: Genotyped single nucleotide polymorphisms (SNPs) of MAOA gene, rs5953210G>A, rs2283725A>G and rs1137070T>C, were significantly associated with current smoking risk in women, and the increased level of plasma MAO-A activity was raised with per copy increment of risk allele in current smokers (P < .01). The haplotype patterns with minor haplotype frequency >.05 were constructed using the Expectation-Maximization algorithm, and the haplotype-specific A-G-C pattern raised the 2-fold risk to develop regular smoking (P = .0005). In the diplotype analysis based on X-inactivation mechanism relative to no and full dosage compensation, we showed that A-G-C haplotype not only increased regular smoking risk in a dose-dependent manner (Ptrend = .0011) but also contributed to smoking risk in the dosage compensation mechanism. Compared to non-smokers, the effect of A-G-C haplotype on random X-activation was associated with the raised MAO-A activity in women smokers (P < .05) although the lifetime cigarette consumption showed a difference that was not statistically significant.

Conclusion: This study provides information on MAOA LD-based haplotype and diplotype patterns in women smoking.

Keywords: MAO-A activity; MAOA; X-inactivation; haplotype; smoking; women.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Age Factors
  • Aged
  • Alleles*
  • Enzyme Activation
  • Female
  • Genetic Association Studies
  • Genetic Predisposition to Disease
  • Genotype
  • Haplotypes*
  • Humans
  • Linkage Disequilibrium*
  • Middle Aged
  • Monoamine Oxidase / genetics*
  • Monoamine Oxidase / metabolism
  • Odds Ratio
  • Polymorphism, Single Nucleotide
  • Smoking / genetics*

Substances

  • Monoamine Oxidase