Structure activity relationship studies on Amb639752: toward the identification of a common pharmacophoric structure for DGKα inhibitors

J Enzyme Inhib Med Chem. 2020 Dec;35(1):96-108. doi: 10.1080/14756366.2019.1684911.

Abstract

A series of analogues of Amb639752, a novel diacylglycerol kinase (DGK) inhibitor recently discovered by us via virtual screening, have been tested. The compounds were evaluated as DGK inhibitors on α, θ, and ζ isoforms, and as antagonists on serotonin receptors. From these assays emerged two novel compounds, namely 11 and 20, which with an IC50 respectively of 1.6 and 1.8 µM are the most potent inhibitors of DGKα discovered to date. Both compounds demonstrated the ability to restore apoptosis in a cellular model of X-linked lymphoproliferative disease as well as the capacity to reduce the migration of cancer cells, suggesting their potential utility in preventing metastasis. Finally, relying on experimental biological data, molecular modelling studies allow us to set a three-point pharmacophore model for DGK inhibitors.

Keywords: Diacylglycerol kinase; enzyme assays; kinase inhibitors; molecular modelling; structure–activity relationship.

MeSH terms

  • Cell Movement / drug effects
  • Cell Survival / drug effects
  • Dose-Response Relationship, Drug
  • HEK293 Cells
  • Humans
  • Indoles / chemical synthesis
  • Indoles / chemistry
  • Indoles / pharmacology*
  • Lipoprotein Lipase / antagonists & inhibitors*
  • Lipoprotein Lipase / metabolism
  • Lymphocytes / drug effects
  • MCF-7 Cells
  • Models, Molecular
  • Molecular Structure
  • Monocytes / drug effects
  • Piperazines / chemical synthesis
  • Piperazines / chemistry
  • Piperazines / pharmacology*
  • Protein Kinase Inhibitors / chemical synthesis
  • Protein Kinase Inhibitors / chemistry
  • Protein Kinase Inhibitors / pharmacology*
  • Structure-Activity Relationship
  • T-Lymphocytes / drug effects

Substances

  • AMB639752
  • Indoles
  • Piperazines
  • Protein Kinase Inhibitors
  • DAGLA protein, human
  • Lipoprotein Lipase

Grants and funding

This work was supported by Università del Piemonte Orientale, Telethon Foundation [Grant GGP16252 to AG and GB], National Ministry of University and Research PRIN 2017 [Grant 201799WCRH to GB], Consorzio Interuniversitario di Biotecnologie (CIB) bando “Network-CIB: Catalisi dell’Innovazione nelle biotecnologie” to GB.