Diagnostic Performance of the GENEDIA MTB/NTM Detection Kit for Detecting Mycobacterium tuberculosis and Nontuberculous Mycobacteria With Sputum Specimens

Ann Lab Med. 2020 Mar;40(2):169-173. doi: 10.3343/alm.2020.40.2.169.

Abstract

The GENEDIA MTB/NTM Detection Kit (GENEDIA MTB/NTM; Green Cross Medical Science Corp., Chungbuk, Korea) is a multiplex real-time PCR assay used for differential identification of Mycobacterium tuberculosis complex (MTBC) and nontuberculous mycobacteria (NTM). While the importance of differential identification of MTB/NTM is recognized, there is limited data on the performance of GENEDIA MTB/NTM assay to date. A total of 687 consecutive sputum specimens were cultured and analyzed with the GENEDIA MTB/NTM and GENEDIA MTB assays. Nineteen specimens (2.8%) were MTBC-positive, and 69 (10.0%) were NTM-positive based on mycobacterial culture. All specimens showed concordant results for MTBC using both assays, with a kappa value of 1.00, overall sensitivity of 63.2% (12/19), and specificity of 100% (668/668). The overall NTM sensitivity and specificity were 23.2% (16/69) and 99.7% (616/618) for GENEDIA MTB/NTM. The association between NTM-positivity using GENEDIA MTB/NTM and the diagnosis of NTM pulmonary disease was not statistically significant. In conclusion, the two real-time PCR assays showed similar diagnostic performance for MTBC detection. However, the sensitivity for NTM detection was lower than that for MTBC detection.

Keywords: Detection; Mycobacterial culture; Mycobacterium tuberculosis complex; Nontuberculous mycobacteria; Performance; Real-time PCR.

Publication types

  • Evaluation Study

MeSH terms

  • DNA, Bacterial / analysis
  • Humans
  • Multiplex Polymerase Chain Reaction
  • Mycobacterium Infections, Nontuberculous / diagnosis*
  • Mycobacterium Infections, Nontuberculous / microbiology
  • Mycobacterium tuberculosis / genetics*
  • Mycobacterium tuberculosis / isolation & purification
  • Nontuberculous Mycobacteria / genetics*
  • Nontuberculous Mycobacteria / isolation & purification
  • Reagent Kits, Diagnostic
  • Sensitivity and Specificity
  • Sputum / microbiology*
  • Tuberculosis / diagnosis*
  • Tuberculosis / microbiology

Substances

  • DNA, Bacterial
  • Reagent Kits, Diagnostic